Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC023158.2-201ENST00000614876 543 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 SNHG22-203ENST00000617833 660 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 MIR7515-201ENST00000637837 67 ntBASIC2.24□□□□□ -2.05
CLDN6P56747 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CLDN6P56747 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLDN6P56747 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN6P56747 MAPK10-266ENST00000641066 6555 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN6P56747 RNU6-1078P-201ENST00000364522 103 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 snoZ40.1-201ENST00000364540 72 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 TAS2R15P-201ENST00000390674 928 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL109755.1-201ENST00000401791 649 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 RNA5SP247-201ENST00000411181 105 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 AC068533.2-201ENST00000411872 306 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 MTCO2P17-201ENST00000424336 677 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 BX119904.4-201ENST00000424402 301 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 AC002381.1-201ENST00000447049 280 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN6P56747 RPS20P20-201ENST00000460498 340 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 LINC00888-204ENST00000487386 421 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 RPS27P27-201ENST00000498779 255 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AC112673.1-201ENST00000513168 575 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN6P56747 Y_RNA.673-201ENST00000516306 88 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 HMGB1P41-201ENST00000520234 440 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 MTCYBP20-201ENST00000524239 1129 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN6P56747 AC126365.2-201ENST00000580630 379 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 NRBF2P1-201ENST00000587407 859 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
CLDN6P56747 AC008498.1-201ENST00000613012 531 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AC013476.2-201ENST00000614456 459 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL357080.1-201ENST00000617394 239 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AL445264.1-201ENST00000621719 171 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 AC010297.1-201ENST00000623948 149 ntBASIC2.23□□□□□ -2.05
CLDN6P56747 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN6P56747 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN6P56747 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLDN6P56747 RNU6-97P-201ENST00000363387 104 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-343P-201ENST00000364709 104 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 Y_RNA.408-201ENST00000383987 102 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-637P-201ENST00000384050 107 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-224P-201ENST00000384055 107 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-140P-201ENST00000384566 108 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-1072P-201ENST00000384703 107 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RNU6-443P-201ENST00000384780 107 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RN7SKP140-201ENST00000411196 284 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC098826.1-201ENST00000433943 471 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 UBE2V1P13-201ENST00000436983 439 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN6P56747 RPL18AP17-201ENST00000455326 198 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN6P56747 MRPS17P3-201ENST00000465453 385 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AP000852.1-201ENST00000472460 573 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC092902.1-201ENST00000486999 259 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 CKS1BP2-201ENST00000497342 240 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC105252.1-201ENST00000503089 286 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN6P56747 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.22□□□□□ -2.05
CLDN6P56747 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN6P56747 AC006499.2-201ENST00000513470 337 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 RN7SKP219-201ENST00000516825 296 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 SNORA31.18-201ENST00000517043 134 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.22□□□□□ -2.05
CLDN6P56747 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN6P56747 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN6P56747 MTND4LP5-201ENST00000605152 292 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 AC024257.5-201ENST00000612739 531 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.22□□□□□ -2.05
CLDN6P56747 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN6P56747 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN6P56747 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN6P56747 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
CLDN6P56747 ZNF72P-201ENST00000425869 1908 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 RN7SKP226-201ENST00000364912 300 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 SNORA23-201ENST00000365128 182 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN6P56747 RNU1-39P-201ENST00000383897 165 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLDN6P56747 RNA5SP213-201ENST00000391031 106 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 RNU6-952P-201ENST00000391164 108 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 RNU2-33P-201ENST00000410344 192 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 TPMTP3-201ENST00000411928 735 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 MORF4L1P6-201ENST00000418771 268 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN6P56747 Z80107.1-201ENST00000436830 412 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 OR10R1P-201ENST00000441524 1141 ntBASIC2.21□□□□□ -2.06
CLDN6P56747 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms