Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AL049734.2-201ENST00000441066 616 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AP1S2P1-201ENST00000457344 379 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 MTND4LP3-201ENST00000468320 276 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 RPS27P26-201ENST00000494583 239 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 HMGN1P28-201ENST00000521340 364 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AP001372.4-201ENST00000524889 472 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.45□□□□□ -2.02
PKNOX1P55347 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
PKNOX1P55347 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AL133153.1-201ENST00000557756 303 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AC061975.8-201ENST00000587058 721 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AF038458.1-201ENST00000588406 262 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 VN1R92P-201ENST00000598511 928 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.45□□□□□ -2.02
PKNOX1P55347 AL035413.2-201ENST00000604801 525 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AL392048.1-201ENST00000613946 534 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AP000676.3-201ENST00000623299 569 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AC112204.3-201ENST00000623822 332 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PKNOX1P55347 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 RNU6-223P-201ENST00000362830 107 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 SNORD113-6-201ENST00000363345 75 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 MIR1305-201ENST00000408300 86 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 MTCO2P17-201ENST00000424336 677 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.44□□□□□ -2.02
PKNOX1P55347 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC107083.1-201ENST00000439643 279 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 MTATP6P30-201ENST00000443540 664 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 MTCYBP3-201ENST00000445588 1137 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AL606517.1-201ENST00000446914 387 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC073901.1-201ENST00000462471 408 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC008481.1-201ENST00000463278 396 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC106872.3-201ENST00000495104 446 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC104685.1-201ENST00000502445 371 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.44□□□□□ -2.02
PKNOX1P55347 CDC42P4-201ENST00000510507 563 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 OR5BM1P-201ENST00000512021 366 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PKNOX1P55347 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PKNOX1P55347 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PKNOX1P55347 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AL391261.3-201ENST00000557194 520 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AL451007.1-201ENST00000595491 289 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC136601.2-201ENST00000604356 474 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AL050303.3-201ENST00000613704 284 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX1P55347 AL137790.1-201ENST00000634283 177 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AP003399.1-201ENST00000637534 361 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 AC103706.2-201ENST00000638080 240 ntBASIC2.44□□□□□ -2.02
PKNOX1P55347 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PKNOX1P55347 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PKNOX1P55347 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PKNOX1P55347 AC093536.2-201ENST00000565257 1406 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 RNA5SP88-201ENST00000365560 109 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 MIR627-201ENST00000384979 97 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 MIR767-201ENST00000390228 109 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 ANAPC10P1-201ENST00000395991 556 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 LARP1BP3-201ENST00000437229 869 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.43□□□□□ -2.02
PKNOX1P55347 CYCSP32-201ENST00000440548 321 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX1P55347 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX1P55347 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AC138853.1-201ENST00000503549 823 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.43□□□□□ -2.02
PKNOX1P55347 AC008716.1-201ENST00000511084 513 ntBASIC2.43□□□□□ -2.02
PKNOX1P55347 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.43□□□□□ -2.02
PKNOX1P55347 RNU6-415P-201ENST00000516252 97 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms