Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC133104.1-201ENST00000429100 218 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH11P55287 RPL23AP22-201ENST00000437556 453 ntBASIC3.07□□□□□ -1.92
CDH11P55287 HMGB3P11-201ENST00000440127 604 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AL662791.1-201ENST00000441992 928 ntBASIC3.07□□□□□ -1.92
CDH11P55287 MTATP6P30-201ENST00000443540 664 ntBASIC3.07□□□□□ -1.92
CDH11P55287 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH11P55287 RPL32P34-201ENST00000486380 400 ntBASIC3.07□□□□□ -1.92
CDH11P55287 RPL9P6-201ENST00000492764 598 ntBASIC3.07□□□□□ -1.92
CDH11P55287 VN1R104P-201ENST00000505115 1009 ntBASIC3.07□□□□□ -1.92
CDH11P55287 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH11P55287 RNU6-445P-201ENST00000516949 107 ntBASIC3.07□□□□□ -1.92
CDH11P55287 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH11P55287 AC128657.1-201ENST00000549459 145 ntBASIC3.07□□□□□ -1.92
CDH11P55287 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH11P55287 AC087883.1-201ENST00000551882 391 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
CDH11P55287 OR4H12P-201ENST00000556269 907 ntBASIC3.07□□□□□ -1.92
CDH11P55287 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.07□□□□□ -1.92
CDH11P55287 AC037471.2-201ENST00000564941 598 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH11P55287 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH11P55287 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH11P55287 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
CDH11P55287 MIR98-201ENST00000606724 119 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH11P55287 AL355365.1-201ENST00000616480 294 ntBASIC3.07□□□□□ -1.92
CDH11P55287 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH11P55287 AC005832.2-201ENST00000538921 1430 ntBASIC3.07□□□□□ -1.92
CDH11P55287 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH11P55287 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH11P55287 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH11P55287 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH11P55287 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH11P55287 Y_RNA.22-201ENST00000362492 102 ntBASIC3.06□□□□□ -1.92
CDH11P55287 RNU5E-6P-201ENST00000365574 115 ntBASIC3.06□□□□□ -1.92
CDH11P55287 RNU6-39P-201ENST00000384344 107 ntBASIC3.06□□□□□ -1.92
CDH11P55287 RNU6-1215P-201ENST00000384441 102 ntBASIC3.06□□□□□ -1.92
CDH11P55287 MIR490-201ENST00000384865 128 ntBASIC3.06□□□□□ -1.92
CDH11P55287 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH11P55287 AC137499.1-201ENST00000427602 88 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 MTND1P1-201ENST00000445453 368 ntBASIC3.06□□□□□ -1.92
CDH11P55287 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH11P55287 AC093392.2-201ENST00000450682 337 ntBASIC3.06□□□□□ -1.92
CDH11P55287 U3.44-201ENST00000458938 192 ntBASIC3.06□□□□□ -1.92
CDH11P55287 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
CDH11P55287 RPS3AP17-201ENST00000472594 777 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AC025518.1-201ENST00000479856 347 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AC107401.1-201ENST00000503426 685 ntBASIC3.06□□□□□ -1.92
CDH11P55287 HMGB1P29-201ENST00000505659 499 ntBASIC3.06□□□□□ -1.92
CDH11P55287 SNORA70.16-201ENST00000516390 95 ntBASIC3.06□□□□□ -1.92
CDH11P55287 SCARNA24.1-201ENST00000516465 137 ntBASIC3.06□□□□□ -1.92
CDH11P55287 SNORA70.24-201ENST00000517233 118 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 AC016957.1-201ENST00000534895 309 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH11P55287 AC007458.1-201ENST00000542812 373 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH11P55287 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH11P55287 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH11P55287 AC067852.3-201ENST00000589177 561 ntBASIC3.06□□□□□ -1.92
CDH11P55287 GLUD1P4-201ENST00000590914 418 ntBASIC3.06□□□□□ -1.92
CDH11P55287 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 DEFB131E-202ENST00000602581 683 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AL391646.1-201ENST00000603860 190 ntBASIC3.06□□□□□ -1.92
CDH11P55287 AC004972.1-201ENST00000623934 2209 ntBASIC3.06□□□□□ -1.92
CDH11P55287 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDH11P55287 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
CDH11P55287 SDAD1P2-201ENST00000441308 2028 ntBASIC3.05□□□□□ -1.92
CDH11P55287 MAPK10-362ENST00000641864 4484 ntBASIC3.05□□□□□ -1.92
CDH11P55287 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH11P55287 RPL7P26-201ENST00000333817 754 ntBASIC3.05□□□□□ -1.92
CDH11P55287 HSPE1P11-201ENST00000339579 310 ntBASIC3.05□□□□□ -1.92
CDH11P55287 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH11P55287 RNU4-35P-201ENST00000362588 141 ntBASIC3.05□□□□□ -1.92
CDH11P55287 SNORD56.2-201ENST00000363242 71 ntBASIC3.05□□□□□ -1.92
CDH11P55287 Y_RNA.159-201ENST00000363674 87 ntBASIC3.05□□□□□ -1.92
CDH11P55287 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDH11P55287 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 TXNP7-201ENST00000406296 293 ntBASIC3.05□□□□□ -1.92
CDH11P55287 Y_RNA.619-201ENST00000410951 90 ntBASIC3.05□□□□□ -1.92
CDH11P55287 RNU2-71P-201ENST00000411395 189 ntBASIC3.05□□□□□ -1.92
CDH11P55287 ELOCP4-201ENST00000420090 333 ntBASIC3.05□□□□□ -1.92
CDH11P55287 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH11P55287 OR2AS1P-201ENST00000427827 319 ntBASIC3.05□□□□□ -1.92
CDH11P55287 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH11P55287 USP12PX-201ENST00000432383 1057 ntBASIC3.05□□□□□ -1.92
CDH11P55287 HMGB3P12-201ENST00000438745 556 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms