Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 SUMO2P6-201ENST00000505273 288 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP1P30622 AL445493.3-201ENST00000619568 477 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CLIP1P30622 TPMTP3-201ENST00000411928 735 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 UBE2V1P6-201ENST00000430840 422 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP1P30622 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.57□□□□□ -2.16
CLIP1P30622 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 AC005730.3-201ENST00000583067 366 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.57□□□□□ -2.16
CLIP1P30622 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.57□□□□□ -2.16
CLIP1P30622 AC145207.9-201ENST00000623802 325 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 AC020923.1-201ENST00000624021 917 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLIP1P30622 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLIP1P30622 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 ERHP2-201ENST00000402323 299 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.56□□□□□ -2.16
CLIP1P30622 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.56□□□□□ -2.16
CLIP1P30622 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.56□□□□□ -2.16
CLIP1P30622 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.56□□□□□ -2.16
CLIP1P30622 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.56□□□□□ -2.16
CLIP1P30622 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.56□□□□□ -2.16
CLIP1P30622 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.56□□□□□ -2.16
CLIP1P30622 MIR3117-201ENST00000584034 78 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 SNORD14A-201ENST00000606526 91 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 AL355816.1-201ENST00000607951 118 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 AC095038.3-201ENST00000634439 195 ntBASIC1.56□□□□□ -2.16
CLIP1P30622 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.56□□□□□ -2.16
CLIP1P30622 CISD1P1-201ENST00000393907 327 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 CYCSP33-201ENST00000414485 327 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 AL161449.1-201ENST00000414531 1199 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 AC096751.1-202ENST00000502691 1067 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 RNU6-943P-201ENST00000516960 98 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.55□□□□□ -2.16
CLIP1P30622 MIR6076-201ENST00000617521 113 ntBASIC1.55□□□□□ -2.16
CLIP1P30622 XKRYP1-201ENST00000423438 492 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.54□□□□□ -2.16
CLIP1P30622 XKRYP2-201ENST00000432915 492 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 MRPS33P3-201ENST00000513456 322 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 MTND2P17-201ENST00000550281 688 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 AC110079.1-202ENST00000635213 138 ntBASIC1.54□□□□□ -2.16
CLIP1P30622 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLIP1P30622 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.53□□□□□ -2.16
CLIP1P30622 RNA5SP252-201ENST00000391131 119 ntBASIC1.53□□□□□ -2.16
CLIP1P30622 RPL21P90-201ENST00000415692 466 ntBASIC1.53□□□□□ -2.16
CLIP1P30622 AC092648.1-201ENST00000425870 423 ntBASIC1.53□□□□□ -2.16
CLIP1P30622 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.53□□□□□ -2.16
CLIP1P30622 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.53□□□□□ -2.16
CLIP1P30622 SETP11-201ENST00000473027 690 ntBASIC1.53□□□□□ -2.16
CLIP1P30622 COL6A4P2-205ENST00000509855 506 ntBASIC1.53□□□□□ -2.16
CLIP1P30622 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.53□□□□□ -2.16
CLIP1P30622 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.53□□□□□ -2.16
CLIP1P30622 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CLIP1P30622 AC111188.2-201ENST00000529697 1387 ntBASIC1.53□□□□□ -2.17
CLIP1P30622 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CLIP1P30622 DDX10P1-201ENST00000448545 1933 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 Y_RNA.393-201ENST00000383936 102 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 U8.14-201ENST00000390843 143 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.52□□□□□ -2.17
CLIP1P30622 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.52□□□□□ -2.17
CLIP1P30622 ARL2BPP3-201ENST00000421226 480 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.52□□□□□ -2.17
CLIP1P30622 AL121769.1-201ENST00000469473 401 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.52□□□□□ -2.17
CLIP1P30622 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.52□□□□□ -2.17
CLIP1P30622 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.52□□□□□ -2.17
CLIP1P30622 MIR4287-201ENST00000579398 78 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 MIR3973-201ENST00000579824 107 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 AC034236.3-201ENST00000605999 461 ntBASIC1.52□□□□□ -2.17
CLIP1P30622 RNU4-41P-201ENST00000364426 143 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 RNU1-139P-201ENST00000391307 165 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 RNU2-41P-201ENST00000410991 178 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.51□□□□□ -2.17
CLIP1P30622 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLIP1P30622 AC026801.1-201ENST00000497178 464 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLIP1P30622 RPL21P5-201ENST00000554662 472 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 OR1M4P-201ENST00000589199 287 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 AC108706.1-201ENST00000611053 297 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 MIR6857-201ENST00000613267 93 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CLIP1P30622 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.51□□□□□ -2.17
CLIP1P30622 MIR4496-201ENST00000635896 61 ntBASIC1.51□□□□□ -2.17
CLIP1P30622 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.51□□□□□ -2.17
CLIP1P30622 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLIP1P30622 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.5□□□□□ -2.17
CLIP1P30622 UBE2D3P2-201ENST00000424409 445 ntBASIC1.5□□□□□ -2.17
CLIP1P30622 AC079780.1-201ENST00000428259 207 ntBASIC1.5□□□□□ -2.17
CLIP1P30622 RPS29P28-201ENST00000446439 141 ntBASIC1.5□□□□□ -2.17
CLIP1P30622 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.5□□□□□ -2.17
CLIP1P30622 GLYCAM1-201ENST00000546596 285 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms