Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AL031183.1-201ENST00000457667 207 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AL358832.1-201ENST00000497800 389 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC091133.4-201ENST00000511142 308 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RN7SKP18-201ENST00000516005 275 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RN7SKP83-201ENST00000516512 178 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
ABCD3P28288 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.35□□□□□ -1.87
ABCD3P28288 AC009063.1-201ENST00000563342 702 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AGGF1P4-201ENST00000568249 801 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC010546.1-201ENST00000569391 485 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
ABCD3P28288 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.35□□□□□ -1.87
ABCD3P28288 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
ABCD3P28288 KLKP1-201ENST00000595979 403 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC004805.2-201ENST00000605382 482 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC022893.3-201ENST00000607665 437 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC009161.2-201ENST00000624626 138 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ABCD3P28288 AC110774.1-201ENST00000623567 2018 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.35□□□□□ -1.87
ABCD3P28288 GABRG2-229ENST00000641017 3628 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
ABCD3P28288 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCD3P28288 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ABCD3P28288 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ABCD3P28288 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ABCD3P28288 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCD3P28288 MTND5P7-201ENST00000413558 1798 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ABCD3P28288 RNU6-456P-201ENST00000384493 107 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 GSTA9P-201ENST00000406231 611 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AL354719.1-201ENST00000406535 843 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 MTCO3P41-201ENST00000414801 328 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCD3P28288 AL451062.2-201ENST00000427515 271 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC010975.2-201ENST00000427781 588 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 USP9YP14-201ENST00000430663 563 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 MTCO2P11-201ENST00000431069 680 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 RPL36AP53-201ENST00000432891 316 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCD3P28288 DDX3P2-201ENST00000446138 111 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 FABP5P13-201ENST00000452144 328 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 CECR9-201ENST00000453421 199 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 MTCYBP1-201ENST00000454315 1119 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 SNORA84-201ENST00000459229 133 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 HSPD1P15-201ENST00000505573 1122 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 HMGB1P29-201ENST00000505659 499 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC108078.2-201ENST00000510750 236 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ABCD3P28288 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCD3P28288 OR5B19P-201ENST00000531766 928 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC068135.2-201ENST00000569293 1028 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC245389.1-201ENST00000605141 529 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AL121992.2-201ENST00000606262 256 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.34□□□□□ -1.87
ABCD3P28288 RNVU1-4-201ENST00000612985 164 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ABCD3P28288 AC073534.2-201ENST00000620377 381 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC099506.2-201ENST00000623074 221 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCD3P28288 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
ABCD3P28288 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.34□□□□□ -1.87
ABCD3P28288 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ABCD3P28288 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.88
ABCD3P28288 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ABCD3P28288 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCD3P28288 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ABCD3P28288 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
ABCD3P28288 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCD3P28288 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCD3P28288 SNORD9-201ENST00000362566 104 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 Y_RNA.367-201ENST00000365544 101 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 RNU6-1103P-201ENST00000384150 107 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 SNORA24.1-201ENST00000384401 135 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 MIR301A-201ENST00000385261 86 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.33□□□□□ -1.88
ABCD3P28288 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCD3P28288 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ABCD3P28288 SYF2P2-201ENST00000417620 583 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 RPL21P40-201ENST00000428586 483 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC073464.1-201ENST00000429823 534 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AL591704.1-201ENST00000432574 275 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.33□□□□□ -1.88
ABCD3P28288 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 RNU7-23P-201ENST00000459465 62 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AP002884.2-201ENST00000471647 395 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 RPS15AP34-201ENST00000487776 387 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms