Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 RNU6-750P-201ENST00000390946 107 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AL109755.1-201ENST00000401791 649 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 SNORA11.4-201ENST00000408823 129 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 BX664727.1-201ENST00000416024 466 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 DEFB130D-201ENST00000426866 237 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 HMGB1P9-201ENST00000429856 646 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 RPS15AP5-201ENST00000436276 388 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 HMGB3P12-201ENST00000438745 556 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC092393.1-201ENST00000439625 742 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC010095.1-201ENST00000443543 144 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 snoU13.26-201ENST00000459452 105 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 RPS15AP17-201ENST00000470598 390 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 RPL9P6-201ENST00000492764 598 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC090453.1-201ENST00000495560 436 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC092436.1-201ENST00000506450 503 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 RNA5SP200-201ENST00000516360 103 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 SCARNA16.3-201ENST00000516595 184 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AP005902.1-201ENST00000521358 186 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 AL035411.2-201ENST00000604022 421 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 FTX_3.1-201ENST00000610451 147 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 uc_338.20-201ENST00000621563 178 ntBASIC1.59□□□□□ -2.15
HLA-DMBP28068 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DMBP28068 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
HLA-DMBP28068 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.59□□□□□ -2.16
HLA-DMBP28068 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HLA-DMBP28068 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.59□□□□□ -2.16
HLA-DMBP28068 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HLA-DMBP28068 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DMBP28068 RNU6-1300P-201ENST00000391046 108 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 SNORA46.1-201ENST00000391069 153 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 SNORD23.1-201ENST00000408212 104 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 RN7SKP32-201ENST00000410167 303 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AL356379.1-201ENST00000414105 126 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 MTATP6P27-201ENST00000416987 621 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 ZNF863P-201ENST00000426746 417 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 SDR42E1P3-201ENST00000438345 502 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 OSTCP8-201ENST00000445117 448 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 RPL39P6-201ENST00000448289 150 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 OFD1P3Y-201ENST00000453312 783 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 MTND2P24-201ENST00000453434 806 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 RPL30P9-201ENST00000465586 330 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC098591.2-201ENST00000510152 315 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 RNU6-528P-201ENST00000516926 100 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 ANP32BP3-201ENST00000559213 706 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 MIR5571-201ENST00000577998 113 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 MIR4637-201ENST00000582405 84 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 AL589743.7-201ENST00000612637 233 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 AC010378.1-201ENST00000619270 362 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 MIR4275-201ENST00000636486 87 ntBASIC1.58□□□□□ -2.16
HLA-DMBP28068 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DMBP28068 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
HLA-DMBP28068 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DMBP28068 RNU5E-8P-201ENST00000363502 116 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 RNU6-1083P-201ENST00000384022 107 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 MIR888-201ENST00000401186 77 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AL023284.1-201ENST00000403956 276 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 RNU2-33P-201ENST00000410344 192 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 RNU2-49P-201ENST00000410666 184 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC096649.2-201ENST00000416186 393 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC008850.1-201ENST00000427546 362 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 RSL24D1P8-201ENST00000434442 492 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 MRPL42P4-201ENST00000453267 443 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC008379.1-201ENST00000463655 464 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC025033.1-201ENST00000463883 194 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 KLF3P2-201ENST00000465138 268 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 DYNLL1P5-201ENST00000467158 270 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC112518.2-201ENST00000508565 425 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 RNU6-1261P-201ENST00000517194 104 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMBP28068 AC023632.1-201ENST00000518463 375 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 IGKV3-31-201ENST00000523109 329 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 AP000873.5-201ENST00000533906 236 ntBASIC1.57□□□□□ -2.16
HLA-DMBP28068 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms