Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ATP5F1P5-201ENST00000526403 760 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.66□□□□□ -1.98
XRCC1P18887 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.66□□□□□ -1.98
XRCC1P18887 ISCA1P3-201ENST00000577104 373 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR544B-201ENST00000582372 78 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR4760-201ENST00000585040 80 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AC019159.1-201ENST00000605094 187 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
XRCC1P18887 AC010133.1-201ENST00000615809 842 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC091965.5-201ENST00000624785 342 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC010680.1-201ENST00000590024 3590 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.98
XRCC1P18887 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.65□□□□□ -1.99
XRCC1P18887 RNU6-1214P-201ENST00000363650 109 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 Y_RNA.302-201ENST00000364997 102 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
XRCC1P18887 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.65□□□□□ -1.99
XRCC1P18887 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.65□□□□□ -1.99
XRCC1P18887 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 Z85995.1-201ENST00000415547 335 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 UBE2FP1-201ENST00000416536 447 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL096701.2-201ENST00000416920 238 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.65□□□□□ -1.99
XRCC1P18887 AC098592.1-201ENST00000419352 333 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.65□□□□□ -1.99
XRCC1P18887 AL606662.1-201ENST00000445763 553 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 TPT1P14-201ENST00000448018 505 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.65□□□□□ -1.99
XRCC1P18887 SNRPGP6-201ENST00000451124 220 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 RPS29P12-201ENST00000460178 152 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 RPS20P22-201ENST00000473700 357 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 UBE2DNL-203ENST00000474922 222 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 RPL23AP41-201ENST00000484754 458 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 RPS15AP36-201ENST00000492022 382 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
XRCC1P18887 SNORA3.4-201ENST00000515969 96 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 NRON-201ENST00000517270 370 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.65□□□□□ -1.99
XRCC1P18887 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
XRCC1P18887 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.65□□□□□ -1.99
XRCC1P18887 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.65□□□□□ -1.99
XRCC1P18887 AC007954.1-201ENST00000554198 494 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.65□□□□□ -1.99
XRCC1P18887 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
XRCC1P18887 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AF038458.1-201ENST00000588406 262 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 NUTF2P8-201ENST00000604593 363 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AL161729.4-201ENST00000604650 476 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 BCRP9-201ENST00000605312 388 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
XRCC1P18887 SDR42E1P2-201ENST00000614861 481 ntBASIC2.65□□□□□ -1.99
XRCC1P18887 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.65□□□□□ -1.99
XRCC1P18887 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
XRCC1P18887 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
XRCC1P18887 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.65□□□□□ -1.99
XRCC1P18887 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
XRCC1P18887 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
XRCC1P18887 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.64□□□□□ -1.99
XRCC1P18887 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.64□□□□□ -1.99
XRCC1P18887 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
XRCC1P18887 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.64□□□□□ -1.99
XRCC1P18887 AC138915.1-201ENST00000565427 1685 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
XRCC1P18887 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
XRCC1P18887 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 RNA5SP139-201ENST00000364340 117 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 SNORD21-201ENST00000383953 95 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AC119751.3-201ENST00000399720 670 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 FO393413.1-201ENST00000402892 195 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
XRCC1P18887 RN7SKP140-201ENST00000411196 284 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AL513331.1-201ENST00000411908 397 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.64□□□□□ -1.99
XRCC1P18887 RPL23AP39-201ENST00000415533 405 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.64□□□□□ -1.99
XRCC1P18887 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.64□□□□□ -1.99
XRCC1P18887 AC092047.1-201ENST00000424997 240 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AL445669.1-201ENST00000426743 755 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 USP12PX-201ENST00000432383 1057 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 MTCO3P45-201ENST00000443036 613 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 MTCYBP3-201ENST00000445588 1137 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 BMI1P1-201ENST00000445879 941 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.64□□□□□ -1.99
XRCC1P18887 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.64□□□□□ -1.99
XRCC1P18887 RNU7-59P-201ENST00000459101 61 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.64□□□□□ -1.99
XRCC1P18887 LTV1P1-201ENST00000510683 1237 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 TTC39CP1-201ENST00000512513 755 ntBASIC2.64□□□□□ -1.99
XRCC1P18887 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.64□□□□□ -1.99
XRCC1P18887 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms