Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR659-201ENST00000384963 97 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RNU11-4P-201ENST00000391149 133 ntBASIC5.11□□□□□ -1.59
LIG1P18858 Y_RNA.645-201ENST00000391229 102 ntBASIC5.11□□□□□ -1.59
LIG1P18858 Z98745.1-201ENST00000402553 494 ntBASIC5.11□□□□□ -1.59
LIG1P18858 Y_RNA.594-201ENST00000410373 140 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RNU2-47P-201ENST00000410649 186 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RPS12P10-201ENST00000427031 377 ntBASIC5.11□□□□□ -1.59
LIG1P18858 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIG1P18858 HIGD1AP11-201ENST00000438361 280 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RPL23AP33-201ENST00000442301 452 ntBASIC5.11□□□□□ -1.59
LIG1P18858 TPT1P13-201ENST00000449760 499 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AC087385.1-201ENST00000475062 312 ntBASIC5.11□□□□□ -1.59
LIG1P18858 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AC108145.1-201ENST00000503770 153 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AC110794.1-201ENST00000505816 425 ntBASIC5.11□□□□□ -1.59
LIG1P18858 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.11□□□□□ -1.59
LIG1P18858 PPBPP1-201ENST00000510807 373 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RN7SKP277-201ENST00000516895 283 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RNU6-699P-201ENST00000517081 110 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RNU1-54P-201ENST00000517181 120 ntBASIC5.11□□□□□ -1.59
LIG1P18858 RN7SKP92-201ENST00000517266 244 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIG1P18858 AP001781.1-201ENST00000530977 207 ntBASIC5.11□□□□□ -1.59
LIG1P18858 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.11□□□□□ -1.59
LIG1P18858 AL355812.1-201ENST00000603215 216 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AC104695.3-201ENST00000604052 296 ntBASIC5.11□□□□□ -1.59
LIG1P18858 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.11□□□□□ -1.59
LIG1P18858 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LIG1P18858 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIG1P18858 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIG1P18858 CPHL1P-201ENST00000461341 3407 ntBASIC5.11□□□□□ -1.59
LIG1P18858 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIG1P18858 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIG1P18858 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIG1P18858 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIG1P18858 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.1□□□□□ -1.59
LIG1P18858 RNU6-434P-201ENST00000384376 107 ntBASIC5.1□□□□□ -1.59
LIG1P18858 RNU4-65P-201ENST00000410473 140 ntBASIC5.1□□□□□ -1.59
LIG1P18858 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 FAR2P4-202ENST00000425399 584 ntBASIC5.1□□□□□ -1.59
LIG1P18858 RSL24D1P6-201ENST00000426934 401 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AC236972.1-201ENST00000433225 199 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 ZNF137P-201ENST00000456718 1920 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AP000873.1-201ENST00000463987 400 ntBASIC5.1□□□□□ -1.59
LIG1P18858 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.1□□□□□ -1.59
LIG1P18858 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 TBCAP3-201ENST00000512475 312 ntBASIC5.1□□□□□ -1.59
LIG1P18858 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 MTCO1P24-201ENST00000515438 1558 ntBASIC5.1□□□□□ -1.59
LIG1P18858 RNU6-635P-201ENST00000516651 102 ntBASIC5.1□□□□□ -1.59
LIG1P18858 IGKV1-32-201ENST00000519290 311 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.1□□□□□ -1.59
LIG1P18858 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.1□□□□□ -1.59
LIG1P18858 AC068790.4-201ENST00000602474 263 ntBASIC5.1□□□□□ -1.59
LIG1P18858 BPIFA4P-203ENST00000603168 689 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AC025946.2-201ENST00000603398 234 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AL158163.1-201ENST00000603915 1649 ntBASIC5.1□□□□□ -1.59
LIG1P18858 AC004696.1-201ENST00000614345 607 ntBASIC5.1□□□□□ -1.59
LIG1P18858 uc_338.32-201ENST00000615087 172 ntBASIC5.1□□□□□ -1.59
LIG1P18858 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.1□□□□□ -1.59
LIG1P18858 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.1□□□□□ -1.59
LIG1P18858 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIG1P18858 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.09□□□□□ -1.59
LIG1P18858 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.09□□□□□ -1.59
LIG1P18858 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIG1P18858 AC005592.1-201ENST00000566527 1640 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RNA5SP513-201ENST00000364648 118 ntBASIC5.09□□□□□ -1.59
LIG1P18858 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LIG1P18858 DEFB109C-201ENST00000382575 264 ntBASIC5.09□□□□□ -1.59
LIG1P18858 DEFB109B-201ENST00000382656 264 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RNU6-339P-201ENST00000384310 107 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AC080125.1-201ENST00000414888 684 ntBASIC5.09□□□□□ -1.59
LIG1P18858 UBE2FP1-201ENST00000416536 447 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.09□□□□□ -1.59
LIG1P18858 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.09□□□□□ -1.59
LIG1P18858 AC245028.1-201ENST00000423259 256 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RPL7P37-201ENST00000425095 738 ntBASIC5.09□□□□□ -1.59
LIG1P18858 DNAJC19P7-201ENST00000428811 344 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RPL23AP25-201ENST00000430973 463 ntBASIC5.09□□□□□ -1.59
LIG1P18858 HLA-N-201ENST00000437516 135 ntBASIC5.09□□□□□ -1.59
LIG1P18858 GAPDHP27-201ENST00000447427 1020 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RPL29P29-201ENST00000448725 423 ntBASIC5.09□□□□□ -1.59
LIG1P18858 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.09□□□□□ -1.59
LIG1P18858 SNORD5.1-201ENST00000458800 75 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AC104472.2-201ENST00000469035 601 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AC103987.1-201ENST00000473394 348 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AP001086.1-201ENST00000494882 321 ntBASIC5.09□□□□□ -1.59
LIG1P18858 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.09□□□□□ -1.59
LIG1P18858 AC015795.1-201ENST00000513669 327 ntBASIC5.09□□□□□ -1.59
LIG1P18858 RNU2-69P-201ENST00000516061 100 ntBASIC5.09□□□□□ -1.59
LIG1P18858 HIGD1AP5-201ENST00000529959 259 ntBASIC5.09□□□□□ -1.59
LIG1P18858 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LIG1P18858 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.09□□□□□ -1.59
LIG1P18858 RPL23AP97-201ENST00000568955 471 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AC234771.5-201ENST00000600161 514 ntBASIC5.09□□□□□ -1.59
LIG1P18858 AC174048.1-201ENST00000603389 144 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms