Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CTLA4P16410 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CTLA4P16410 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CTLA4P16410 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CTLA4P16410 AL079343.1-201ENST00000572358 1771 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTLA4P16410 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTLA4P16410 RNU4-51P-201ENST00000364206 140 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 Y_RNA.234-201ENST00000364409 97 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 RNA5SP37-201ENST00000365420 130 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 RNU6-359P-201ENST00000365466 108 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 Y_RNA.548-201ENST00000384656 105 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC092047.1-201ENST00000424997 240 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AL049734.2-201ENST00000441066 616 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 BNIP3P2-201ENST00000441221 577 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 DDX3P2-201ENST00000446138 111 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AL031659.1-201ENST00000447075 539 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 EEF1B2P7-201ENST00000451177 676 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 snoU13.8-201ENST00000458890 104 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AL049874.1-201ENST00000489560 388 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC114786.4-201ENST00000508771 728 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC114797.1-201ENST00000514003 728 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.85□□□□□ -2.11
CTLA4P16410 SCARNA17.1-201ENST00000516211 143 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 SCARNA17.2-201ENST00000516334 143 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 IGLV3-17-201ENST00000519099 244 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC007115.1-201ENST00000546853 234 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 RNU6-1192P-201ENST00000612197 107 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC025594.3-201ENST00000613068 790 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 SCARNA17.4-201ENST00000614296 143 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 RNU6-489P-201ENST00000618289 107 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC010378.1-201ENST00000619270 362 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AL445264.1-201ENST00000621719 171 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC008443.7-201ENST00000622195 246 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 OR1S1-201ENST00000624470 978 ntBASIC1.85□□□□□ -2.11
CTLA4P16410 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CTLA4P16410 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.85□□□□□ -2.11
CTLA4P16410 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CTLA4P16410 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTLA4P16410 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CTLA4P16410 RNU5E-8P-201ENST00000363502 116 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 Y_RNA.408-201ENST00000383987 102 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 RNU6-217P-201ENST00000384164 104 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 RNA5SP80-201ENST00000410475 111 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 RNU6-920P-201ENST00000410926 92 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AC069282.1-201ENST00000411911 526 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 MYL8P-204ENST00000431574 518 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 USP12PX-201ENST00000432383 1057 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.84□□□□□ -2.11
CTLA4P16410 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.84□□□□□ -2.11
CTLA4P16410 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CTLA4P16410 PIGFP3-201ENST00000441918 722 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 MTND2P24-201ENST00000453434 806 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 RNU7-136P-201ENST00000458819 69 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 UBE2DNL-203ENST00000474922 222 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 LARP1BP2-201ENST00000486594 519 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AC079203.1-201ENST00000487972 404 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AC138853.1-201ENST00000503549 823 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.84□□□□□ -2.11
CTLA4P16410 AC113347.3-201ENST00000509113 148 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.84□□□□□ -2.11
CTLA4P16410 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CTLA4P16410 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.84□□□□□ -2.11
CTLA4P16410 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.84□□□□□ -2.11
CTLA4P16410 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.84□□□□□ -2.11
CTLA4P16410 SNORD53-201ENST00000579969 78 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 HMGN2P15-201ENST00000585707 270 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.84□□□□□ -2.11
CTLA4P16410 AC112220.2-201ENST00000605513 533 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 OR10AB1P-201ENST00000609613 938 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 AL159972.1-201ENST00000625150 448 ntBASIC1.84□□□□□ -2.11
CTLA4P16410 OR4G2P-202ENST00000641004 1759 ntBASIC1.84□□□□□ -2.12
CTLA4P16410 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.84□□□□□ -2.12
CTLA4P16410 AC004944.1-201ENST00000517807 3059 ntBASIC1.84□□□□□ -2.12
CTLA4P16410 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CTLA4P16410 SNORA40.2-201ENST00000390847 128 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 RNU6-952P-201ENST00000391164 108 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 TPMTP3-201ENST00000411928 735 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 MORF4L1P6-201ENST00000418771 268 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 AC008850.1-201ENST00000427546 362 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 AL356320.1-201ENST00000429616 163 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.83□□□□□ -2.12
CTLA4P16410 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.83□□□□□ -2.12
CTLA4P16410 Z82210.1-201ENST00000440037 231 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 USP9YP8-201ENST00000441913 500 ntBASIC1.83□□□□□ -2.12
CTLA4P16410 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.83□□□□□ -2.12
CTLA4P16410 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.83□□□□□ -2.12
CTLA4P16410 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms