Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC104763.3-201ENST00000613765 618 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC006213.5-201ENST00000619673 288 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC026634.1-201ENST00000634369 198 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL1P09341 MTND5P30-201ENST00000452896 1731 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CXCL1P09341 RNU6-582P-201ENST00000362989 107 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 U8.3-201ENST00000363321 132 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 MIR218-1-201ENST00000384999 110 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 OR4K6P-201ENST00000416478 897 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 PPP1R11P2-201ENST00000423543 382 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL1P09341 MED14P1-201ENST00000430517 648 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CXCL1P09341 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.37□□□□□ -2.19
CXCL1P09341 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.37□□□□□ -2.19
CXCL1P09341 AP001486.1-201ENST00000463339 476 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 RPL23AP42-201ENST00000471152 471 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AF213884.2-201ENST00000510417 903 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AC109471.1-201ENST00000511631 612 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL1P09341 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL1P09341 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL1P09341 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.37□□□□□ -2.19
CXCL1P09341 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.37□□□□□ -2.19
CXCL1P09341 AC007151.1-201ENST00000572774 483 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 MIR4299-201ENST00000577899 72 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 MIR3200-201ENST00000580767 85 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AC105245.1-201ENST00000581934 244 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AC133794.1-201ENST00000602731 914 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.37□□□□□ -2.19
CXCL1P09341 MIR1264-201ENST00000616374 69 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 AP002791.1-201ENST00000623291 381 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 PISRT1-201ENST00000626175 531 ntBASIC1.37□□□□□ -2.19
CXCL1P09341 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.37□□□□□ -2.19
CXCL1P09341 SNORD56.4-201ENST00000363883 71 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 RNU6-140P-201ENST00000384566 108 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CXCL1P09341 AL109755.1-201ENST00000401791 649 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 MTCO2P31-201ENST00000402702 684 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AL592310.1-201ENST00000414330 671 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 BPY2DP-201ENST00000422208 265 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL1P09341 AL590623.1-201ENST00000427864 105 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 RPL30P4-201ENST00000429309 333 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 MTND4LP14-201ENST00000429447 288 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC093155.1-201ENST00000440164 826 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC098831.1-201ENST00000440661 216 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 MTND2P24-201ENST00000453434 806 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 CDC42P1-201ENST00000456658 548 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 SNORD121B-201ENST00000458838 81 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC008526.1-201ENST00000509149 338 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 RNA5SP291-201ENST00000517222 105 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 AP001317.1-201ENST00000531194 960 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL1P09341 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 AC012435.1-202ENST00000568772 240 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.36□□□□□ -2.19
CXCL1P09341 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.36□□□□□ -2.19
CXCL1P09341 MTND4LP5-201ENST00000605152 292 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC007038.2-201ENST00000608095 740 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC004067.1-201ENST00000608733 700 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AP000238.1-201ENST00000608759 426 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AL392048.1-201ENST00000613946 534 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 AC024581.2-201ENST00000619986 252 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 YWHAEP7-203ENST00000622054 312 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 MIR4275-201ENST00000636486 87 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CXCL1P09341 AL136360.1-201ENST00000503377 1900 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CXCL1P09341 ZNF702P-202ENST00000434269 1966 ntBASIC1.36□□□□□ -2.19
CXCL1P09341 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CXCL1P09341 PTGES3P2-201ENST00000407942 482 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 RNU2-33P-201ENST00000410344 192 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 POLHP1-201ENST00000411806 470 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 EDDM3CP-201ENST00000415977 425 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC096920.1-201ENST00000423991 241 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 BX276092.3-201ENST00000424182 230 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL1P09341 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AL360221.1-201ENST00000445989 335 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL1P09341 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL1P09341 RPS20P22-201ENST00000473700 357 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 HMGB1P36-201ENST00000487709 576 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL1P09341 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL1P09341 AC118282.2-201ENST00000508739 374 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 RNA5SP137-201ENST00000516833 135 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 EEF1A1P37-201ENST00000522748 715 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms