Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC016696.1-201ENST00000446949 318 ntBASIC3.39□□□□□ -1.87
RB1P06400 GAPDHP27-201ENST00000447427 1020 ntBASIC3.39□□□□□ -1.87
RB1P06400 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
RB1P06400 MTND1P12-201ENST00000455231 147 ntBASIC3.39□□□□□ -1.87
RB1P06400 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.39□□□□□ -1.87
RB1P06400 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC091965.2-201ENST00000512324 613 ntBASIC3.39□□□□□ -1.87
RB1P06400 TTC39CP1-201ENST00000512513 755 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC009812.2-201ENST00000517657 457 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
RB1P06400 CASP1P1-201ENST00000526345 212 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
RB1P06400 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.39□□□□□ -1.87
RB1P06400 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.39□□□□□ -1.87
RB1P06400 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.39□□□□□ -1.87
RB1P06400 ELOCP29-201ENST00000588193 334 ntBASIC3.39□□□□□ -1.87
RB1P06400 HMGN1P30-201ENST00000589286 268 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC097065.2-201ENST00000608159 533 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC004908.3-201ENST00000610248 625 ntBASIC3.39□□□□□ -1.87
RB1P06400 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RB1P06400 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.39□□□□□ -1.87
RB1P06400 MIR6076-201ENST00000617521 113 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
RB1P06400 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.39□□□□□ -1.87
RB1P06400 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.39□□□□□ -1.87
RB1P06400 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RB1P06400 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RB1P06400 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.38□□□□□ -1.87
RB1P06400 SNORD116-9-201ENST00000384000 95 ntBASIC3.38□□□□□ -1.87
RB1P06400 SNORD116-3-201ENST00000384287 95 ntBASIC3.38□□□□□ -1.87
RB1P06400 SNORD116-7-201ENST00000384404 95 ntBASIC3.38□□□□□ -1.87
RB1P06400 SNORD116-5-201ENST00000384462 95 ntBASIC3.38□□□□□ -1.87
RB1P06400 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
RB1P06400 SAR1AP2-201ENST00000392696 594 ntBASIC3.38□□□□□ -1.87
RB1P06400 AL136116.1-201ENST00000403591 381 ntBASIC3.38□□□□□ -1.87
RB1P06400 AL513331.1-201ENST00000411908 397 ntBASIC3.38□□□□□ -1.87
RB1P06400 SPA17P1-201ENST00000416656 452 ntBASIC3.38□□□□□ -1.87
RB1P06400 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.38□□□□□ -1.87
RB1P06400 AC006366.1-201ENST00000422002 759 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC019097.1-201ENST00000424783 735 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC092573.2-201ENST00000434546 243 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC020550.1-201ENST00000447385 163 ntBASIC3.38□□□□□ -1.87
RB1P06400 AL590664.1-201ENST00000448065 339 ntBASIC3.38□□□□□ -1.87
RB1P06400 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.38□□□□□ -1.87
RB1P06400 AC068724.1-201ENST00000487100 792 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC114797.1-201ENST00000514003 728 ntBASIC3.38□□□□□ -1.87
RB1P06400 RNA5SP356-201ENST00000515972 94 ntBASIC3.38□□□□□ -1.87
RB1P06400 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.38□□□□□ -1.87
RB1P06400 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.38□□□□□ -1.87
RB1P06400 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
RB1P06400 AC027309.3-201ENST00000623419 351 ntBASIC3.38□□□□□ -1.87
RB1P06400 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RB1P06400 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RB1P06400 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RB1P06400 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
RB1P06400 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RB1P06400 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
RB1P06400 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.37□□□□□ -1.87
RB1P06400 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
RB1P06400 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
RB1P06400 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.37□□□□□ -1.87
RB1P06400 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 MIR449A-201ENST00000362113 91 ntBASIC3.37□□□□□ -1.87
RB1P06400 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RB1P06400 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
RB1P06400 RPS15AP12-201ENST00000419498 388 ntBASIC3.37□□□□□ -1.87
RB1P06400 RPS15AP6-201ENST00000420703 385 ntBASIC3.37□□□□□ -1.87
RB1P06400 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.37□□□□□ -1.87
RB1P06400 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.37□□□□□ -1.87
RB1P06400 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.37□□□□□ -1.87
RB1P06400 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.37□□□□□ -1.87
RB1P06400 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.37□□□□□ -1.87
RB1P06400 AC093156.1-201ENST00000440382 670 ntBASIC3.37□□□□□ -1.87
RB1P06400 PGBD4P3-201ENST00000440731 581 ntBASIC3.37□□□□□ -1.87
RB1P06400 MTND6P13-201ENST00000443510 523 ntBASIC3.37□□□□□ -1.87
RB1P06400 CBWD4P-201ENST00000445695 655 ntBASIC3.37□□□□□ -1.87
RB1P06400 ST13P20-201ENST00000447996 1065 ntBASIC3.37□□□□□ -1.87
RB1P06400 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
RB1P06400 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
RB1P06400 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.37□□□□□ -1.87
RB1P06400 RPL30P14-201ENST00000482744 348 ntBASIC3.37□□□□□ -1.87
RB1P06400 FCF1P3-201ENST00000496394 590 ntBASIC3.37□□□□□ -1.87
RB1P06400 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
RB1P06400 MTND5P13-201ENST00000513046 1079 ntBASIC3.37□□□□□ -1.87
RB1P06400 AC117532.1-201ENST00000514638 323 ntBASIC3.37□□□□□ -1.87
RB1P06400 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
RB1P06400 OR5G4P-201ENST00000525251 760 ntBASIC3.37□□□□□ -1.87
RB1P06400 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
RB1P06400 AP000860.1-201ENST00000605250 559 ntBASIC3.37□□□□□ -1.87
RB1P06400 AC135507.1-201ENST00000607214 561 ntBASIC3.37□□□□□ -1.87
RB1P06400 AC006338.1-201ENST00000618453 749 ntBASIC3.37□□□□□ -1.87
RB1P06400 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RB1P06400 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms