Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL357094.1-201ENST00000603845 844 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 BCRP9-201ENST00000605312 388 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 AC107952.2-201ENST00000606048 486 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DPB1P04440 U4.3-201ENST00000621047 82 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 AC112204.3-201ENST00000623822 332 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DPB1P04440 MTND5P33-201ENST00000571250 1450 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 DDX10P1-201ENST00000448545 1933 ntBASIC2.19□□□□□ -2.06
HLA-DPB1P04440 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DPB1P04440 RPL21P132-201ENST00000331267 462 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 FAM133CP-201ENST00000332869 704 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RNU6-723P-201ENST00000383973 107 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RSL24D1P4-201ENST00000400938 484 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AL139039.1-201ENST00000401900 692 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 MTCO2P21-201ENST00000419780 677 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AL590383.1-201ENST00000428602 75 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC007919.1-201ENST00000429380 217 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 PIGFP3-201ENST00000441918 722 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC009961.3-201ENST00000449832 765 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RPS20P20-201ENST00000460498 340 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RN7SL432P-201ENST00000484057 298 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RNU6-311P-201ENST00000516224 102 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RNU6-415P-201ENST00000516252 97 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 RNU6-1282P-201ENST00000516735 96 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC087465.1-201ENST00000560574 245 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC136618.2-201ENST00000575091 400 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AL391001.1-201ENST00000602747 715 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC021171.1-201ENST00000603137 706 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC013476.2-201ENST00000614456 459 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC010133.1-201ENST00000615809 842 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AC012150.2-201ENST00000621300 544 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 PCMTD1P7-201ENST00000634506 357 ntBASIC2.18□□□□□ -2.06
HLA-DPB1P04440 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DPB1P04440 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 RNU6-432P-201ENST00000384196 109 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 MTND1P21-201ENST00000412991 285 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL451054.2-201ENST00000420896 202 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL365496.1-201ENST00000426885 215 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC009414.1-201ENST00000427200 443 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 MTATP6P30-201ENST00000443540 664 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 FAM103A2P-201ENST00000444122 354 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 WASF1P1-201ENST00000447560 1131 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 RPL23AP35-201ENST00000451906 501 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AP000852.1-201ENST00000472460 573 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AIG1P1-201ENST00000503376 148 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 RNU1-103P-201ENST00000516502 125 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AP001372.4-201ENST00000524889 472 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 TRAV28-201ENST00000557548 323 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 MIR544B-201ENST00000582372 78 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC061975.8-201ENST00000587058 721 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL050303.3-201ENST00000613704 284 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AL607023.1-201ENST00000620045 248 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 AC073308.1-201ENST00000623696 305 ntBASIC2.17□□□□□ -2.06
HLA-DPB1P04440 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DPB1P04440 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DPB1P04440 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DPB1P04440 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HLA-DPB1P04440 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HLA-DPB1P04440 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms