Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF849P-201ENST00000594711 1566 ntBASIC1.99□□□□□ -2.09
APOEP02649 RNU6-839P-201ENST00000363347 108 ntBASIC1.99□□□□□ -2.09
APOEP02649 RNU6-481P-201ENST00000384194 107 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC023141.4-201ENST00000412031 328 ntBASIC1.99□□□□□ -2.09
APOEP02649 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.99□□□□□ -2.09
APOEP02649 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
APOEP02649 FABP5P13-201ENST00000452144 328 ntBASIC1.99□□□□□ -2.09
APOEP02649 USP9YP34-201ENST00000453983 808 ntBASIC1.99□□□□□ -2.09
APOEP02649 AP1S2P1-201ENST00000457344 379 ntBASIC1.99□□□□□ -2.09
APOEP02649 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.99□□□□□ -2.09
APOEP02649 AL121769.1-201ENST00000469473 401 ntBASIC1.99□□□□□ -2.09
APOEP02649 MTAPP1-201ENST00000489154 819 ntBASIC1.99□□□□□ -2.09
APOEP02649 RPS29P20-201ENST00000489592 171 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.99□□□□□ -2.09
APOEP02649 AC023141.11-201ENST00000508864 202 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.99□□□□□ -2.09
APOEP02649 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.99□□□□□ -2.09
APOEP02649 RNU5F-8P-201ENST00000515941 111 ntBASIC1.99□□□□□ -2.09
APOEP02649 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.99□□□□□ -2.09
APOEP02649 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
APOEP02649 AC021749.1-201ENST00000604322 607 ntBASIC1.99□□□□□ -2.09
APOEP02649 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.99□□□□□ -2.09
APOEP02649 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOEP02649 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
APOEP02649 RNU6-883P-201ENST00000384597 107 ntBASIC1.98□□□□□ -2.09
APOEP02649 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
APOEP02649 AL356131.1-201ENST00000405826 414 ntBASIC1.98□□□□□ -2.09
APOEP02649 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
APOEP02649 RNU6-575P-201ENST00000411326 105 ntBASIC1.98□□□□□ -2.09
APOEP02649 MTCO3P1-205ENST00000422088 832 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC092047.1-201ENST00000424997 240 ntBASIC1.98□□□□□ -2.09
APOEP02649 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.98□□□□□ -2.09
APOEP02649 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.98□□□□□ -2.09
APOEP02649 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.98□□□□□ -2.09
APOEP02649 VN1R10P-201ENST00000447106 875 ntBASIC1.98□□□□□ -2.09
APOEP02649 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.98□□□□□ -2.09
APOEP02649 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
APOEP02649 AP005902.1-201ENST00000521358 186 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.98□□□□□ -2.09
APOEP02649 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.98□□□□□ -2.09
APOEP02649 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.98□□□□□ -2.09
APOEP02649 AC040174.2-201ENST00000602701 465 ntBASIC1.98□□□□□ -2.09
APOEP02649 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC025588.2-201ENST00000604851 466 ntBASIC1.98□□□□□ -2.09
APOEP02649 KATNBL1P1-201ENST00000605192 748 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC080013.4-201ENST00000607624 649 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC004067.1-201ENST00000608733 700 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC009318.2-201ENST00000610917 651 ntBASIC1.98□□□□□ -2.09
APOEP02649 AC008498.1-201ENST00000613012 531 ntBASIC1.98□□□□□ -2.09
APOEP02649 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
APOEP02649 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
APOEP02649 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
APOEP02649 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOEP02649 RNU6-217P-201ENST00000384164 104 ntBASIC1.97□□□□□ -2.09
APOEP02649 TMSB4XP8-201ENST00000402089 135 ntBASIC1.97□□□□□ -2.09
APOEP02649 CIR1P3-201ENST00000405137 479 ntBASIC1.97□□□□□ -2.09
APOEP02649 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
APOEP02649 TMSB4XP6-201ENST00000415187 135 ntBASIC1.97□□□□□ -2.09
APOEP02649 CYCSP48-201ENST00000417124 323 ntBASIC1.97□□□□□ -2.09
APOEP02649 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.97□□□□□ -2.09
APOEP02649 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.97□□□□□ -2.09
APOEP02649 AC019178.2-201ENST00000423595 505 ntBASIC1.97□□□□□ -2.09
APOEP02649 TMSB4XP1-201ENST00000424567 135 ntBASIC1.97□□□□□ -2.09
APOEP02649 AL096803.2-201ENST00000450032 677 ntBASIC1.97□□□□□ -2.09
APOEP02649 MTND2P24-201ENST00000453434 806 ntBASIC1.97□□□□□ -2.09
APOEP02649 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 AC022447.3-201ENST00000506865 495 ntBASIC1.97□□□□□ -2.09
APOEP02649 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.97□□□□□ -2.09
APOEP02649 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
APOEP02649 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.97□□□□□ -2.09
APOEP02649 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 MIR5571-201ENST00000577998 113 ntBASIC1.97□□□□□ -2.09
APOEP02649 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 AL450336.1-201ENST00000605180 586 ntBASIC1.97□□□□□ -2.09
APOEP02649 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
APOEP02649 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
APOEP02649 U6.101-201ENST00000637707 76 ntBASIC1.97□□□□□ -2.09
APOEP02649 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
APOEP02649 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOEP02649 RNU6-353P-201ENST00000364266 108 ntBASIC1.96□□□□□ -2.1
APOEP02649 RNU4-27P-201ENST00000410889 139 ntBASIC1.96□□□□□ -2.1
APOEP02649 AC007742.1-201ENST00000425789 329 ntBASIC1.96□□□□□ -2.1
APOEP02649 ELOCP26-201ENST00000436067 329 ntBASIC1.96□□□□□ -2.1
APOEP02649 RPS15AP5-201ENST00000436276 388 ntBASIC1.96□□□□□ -2.1
APOEP02649 PIGFP3-201ENST00000441918 722 ntBASIC1.96□□□□□ -2.1
APOEP02649 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.96□□□□□ -2.1
APOEP02649 AC005297.2-201ENST00000450430 606 ntBASIC1.96□□□□□ -2.1
APOEP02649 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.96□□□□□ -2.1
APOEP02649 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.96□□□□□ -2.1
APOEP02649 RPL23AP42-201ENST00000471152 471 ntBASIC1.96□□□□□ -2.1
APOEP02649 RPL23AP41-201ENST00000484754 458 ntBASIC1.96□□□□□ -2.1
APOEP02649 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.96□□□□□ -2.1
APOEP02649 HMGN1P28-201ENST00000521340 364 ntBASIC1.96□□□□□ -2.1
APOEP02649 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
APOEP02649 AC110588.1-201ENST00000559699 137 ntBASIC1.96□□□□□ -2.1
APOEP02649 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms