Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.95□□□□□ -2.26
SPTA1P02549 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SPTA1P02549 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.95□□□□□ -2.26
SPTA1P02549 SNORD84-203ENST00000584275 78 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 AL355816.1-201ENST00000607951 118 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 ICE2P2-201ENST00000483823 2787 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RNU6-1235P-201ENST00000384559 107 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AC244098.2-201ENST00000422068 99 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AP000949.1-201ENST00000438328 629 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 SDCBPP1-201ENST00000440192 890 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RNU6-498P-201ENST00000459468 107 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AC090096.1-201ENST00000489168 390 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AP004607.1-201ENST00000524456 203 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.94□□□□□ -2.26
SPTA1P02549 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.94□□□□□ -2.26
SPTA1P02549 MTND2P13-201ENST00000577438 1039 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RPS15AP11-201ENST00000594193 385 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RNA5SP108-201ENST00000605921 117 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AC034236.3-201ENST00000605999 461 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 MFSD8-213ENST00000641134 1327 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SPTA1P02549 AC110792.3-201ENST00000595906 1614 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RNU4-7P-201ENST00000364758 141 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 RNU4-31P-201ENST00000384211 141 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 Z95118.1-201ENST00000421372 247 ntBASIC0.94□□□□□ -2.26
SPTA1P02549 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.94□□□□□ -2.26
SPTA1P02549 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.94□□□□□ -2.26
SPTA1P02549 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
SPTA1P02549 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.94□□□□□ -2.26
SPTA1P02549 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SPTA1P02549 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SPTA1P02549 MRPS36P1-201ENST00000421291 307 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 AL590233.1-201ENST00000430017 456 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 IPO7P1-201ENST00000442031 636 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.93□□□□□ -2.26
SPTA1P02549 AL589743.1-201ENST00000551932 2712 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 Y_RNA.136-201ENST00000363444 102 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 RNA5SP105-201ENST00000391123 113 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 MIR936-201ENST00000401264 98 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 RPL23AP47-201ENST00000408017 460 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 RNU4-72P-201ENST00000410754 173 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 RFESDP1-201ENST00000422350 461 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTA1P02549 AC146507.1-201ENST00000468335 354 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 BZW1P2-201ENST00000473537 826 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 SNORA31.16-201ENST00000516773 139 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 SNORD59.2-201ENST00000516873 68 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.93□□□□□ -2.26
SPTA1P02549 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.93□□□□□ -2.26
SPTA1P02549 MTCO1P40-201ENST00000574371 625 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 U73023.1-201ENST00000603134 700 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 AC019131.2-201ENST00000609071 870 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 AC245884.12-201ENST00000615364 59 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 AC140725.3-201ENST00000616193 880 ntBASIC0.93□□□□□ -2.26
SPTA1P02549 RNU1-78P-201ENST00000391248 165 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.92□□□□□ -2.26
SPTA1P02549 MTATP6P4-201ENST00000427725 675 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTA1P02549 AC113155.1-201ENST00000511141 769 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 SNORA31.20-201ENST00000517111 133 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 COX6CP3-201ENST00000580869 223 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 AC006270.3-201ENST00000605967 1036 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.92□□□□□ -2.26
SPTA1P02549 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.92□□□□□ -2.26
SPTA1P02549 MIR2909-201ENST00000617113 69 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.92□□□□□ -2.26
SPTA1P02549 AC010889.1-201ENST00000566193 2666 ntBASIC0.92□□□□□ -2.26
SPTA1P02549 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
SPTA1P02549 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SPTA1P02549 AC096533.1-201ENST00000411645 353 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC074117.2-201ENST00000417130 397 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.91□□□□□ -2.26
SPTA1P02549 SNORD97-201ENST00000459187 142 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC097493.1-201ENST00000463958 372 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SPTA1P02549 AC008962.1-201ENST00000605729 304 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AL589935.2-201ENST00000616471 1231 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 MIR6076-201ENST00000617521 113 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 SNORA14A-201ENST00000364773 135 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 FO393413.1-201ENST00000402892 195 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 GDI2P2-201ENST00000445131 608 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.91□□□□□ -2.26
SPTA1P02549 HMGN2P16-201ENST00000456802 261 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 ATG12P2-201ENST00000456830 416 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 MTCYBP35-201ENST00000503630 1137 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.91□□□□□ -2.26
SPTA1P02549 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.91□□□□□ -2.26
SPTA1P02549 AC083923.1-201ENST00000523708 376 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC025918.2-201ENST00000558683 763 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC068338.1-201ENST00000565567 176 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 MIR3122-201ENST00000577243 73 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 DPRXP5-201ENST00000604662 539 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 AC002550.2-201ENST00000621246 394 ntBASIC0.91□□□□□ -2.26
SPTA1P02549 RNU6-234P-201ENST00000365229 104 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 CD24P4-201ENST00000382840 243 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 SNORD56-201ENST00000413522 71 ntBASIC0.9□□□□□ -2.26
SPTA1P02549 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.9□□□□□ -2.26
SPTA1P02549 ZNF90P2-204ENST00000419323 1075 ntBASIC0.9□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms