Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 uc_338.5-201ENST00000611839 155 ntBASIC4.01□□□□□ -1.77
COL3A1P02461 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.01□□□□□ -1.77
COL3A1P02461 AC241377.1-201ENST00000619797 406 ntBASIC4.01□□□□□ -1.77
COL3A1P02461 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
COL3A1P02461 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL3A1P02461 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.01□□□□□ -1.77
COL3A1P02461 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL3A1P02461 ZNF807-201ENST00000328088 1707 ntBASIC4.01□□□□□ -1.77
COL3A1P02461 MTND5P16-201ENST00000460269 1703 ntBASIC4.01□□□□□ -1.77
COL3A1P02461 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
COL3A1P02461 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL3A1P02461 Y_RNA.145-201ENST00000363527 102 ntBASIC4□□□□□ -1.77
COL3A1P02461 U3.6-201ENST00000363622 211 ntBASIC4□□□□□ -1.77
COL3A1P02461 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC110754.1-201ENST00000399740 601 ntBASIC4□□□□□ -1.77
COL3A1P02461 MIR548P-201ENST00000408336 84 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4□□□□□ -1.77
COL3A1P02461 MTCO3P46-201ENST00000425787 232 ntBASIC4□□□□□ -1.77
COL3A1P02461 GPM6BP2-201ENST00000432046 144 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC108059.2-201ENST00000434626 151 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4□□□□□ -1.77
COL3A1P02461 GPM6BP1-201ENST00000446387 144 ntBASIC4□□□□□ -1.77
COL3A1P02461 MRPL50P4-201ENST00000446432 475 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4□□□□□ -1.77
COL3A1P02461 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL3A1P02461 AC083798.1-201ENST00000472671 131 ntBASIC4□□□□□ -1.77
COL3A1P02461 RN7SL442P-201ENST00000473804 320 ntBASIC4□□□□□ -1.77
COL3A1P02461 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4□□□□□ -1.77
COL3A1P02461 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
COL3A1P02461 RNU6-150P-201ENST00000516237 95 ntBASIC4□□□□□ -1.77
COL3A1P02461 SNORA48.10-201ENST00000516965 160 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4□□□□□ -1.77
COL3A1P02461 AC034105.3-201ENST00000565294 442 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC055876.1-202ENST00000567053 138 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC005668.1-201ENST00000571142 476 ntBASIC4□□□□□ -1.77
COL3A1P02461 MIR3171-201ENST00000584270 74 ntBASIC4□□□□□ -1.77
COL3A1P02461 HNRNPDLP4-201ENST00000605144 301 ntBASIC4□□□□□ -1.77
COL3A1P02461 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4□□□□□ -1.77
COL3A1P02461 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4□□□□□ -1.77
COL3A1P02461 AC024940.5-201ENST00000622889 474 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC138649.5-201ENST00000637456 137 ntBASIC4□□□□□ -1.77
COL3A1P02461 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4□□□□□ -1.77
COL3A1P02461 AC233263.6-201ENST00000631132 1963 ntBASIC4□□□□□ -1.77
COL3A1P02461 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 Y_RNA.202-201ENST00000364083 110 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 SNORA62.2-201ENST00000364672 152 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 RNU6-301P-201ENST00000384277 107 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 Y_RNA.474-201ENST00000384341 102 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 MRPL42P2-201ENST00000403169 426 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 RN7SKP266-201ENST00000410232 287 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC127391.1-201ENST00000411737 98 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.99□□□□□ -1.77
COL3A1P02461 ELOCP4-201ENST00000420090 333 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.99□□□□□ -1.77
COL3A1P02461 OR51AB1P-201ENST00000429046 620 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 RPS7P5-201ENST00000441482 581 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AL135938.1-201ENST00000443141 297 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.99□□□□□ -1.77
COL3A1P02461 MTCO1P27-201ENST00000448269 226 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC103851.1-201ENST00000506833 274 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.99□□□□□ -1.77
COL3A1P02461 AC034159.1-201ENST00000513885 583 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 RNU6-1170P-201ENST00000515974 106 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 SNORA64.4-201ENST00000516632 81 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 RNU6-1003P-201ENST00000517099 105 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 AP005597.4-201ENST00000526762 229 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.99□□□□□ -1.77
COL3A1P02461 AL355836.1-201ENST00000555951 870 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC006006.1-201ENST00000603082 144 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AL008729.2-201ENST00000606393 473 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC243773.3-201ENST00000613270 256 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AL133173.2-201ENST00000614270 90 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AC018926.3-201ENST00000618841 406 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 AL078596.1-201ENST00000624856 447 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 AC100810.6-201ENST00000638068 285 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL3A1P02461 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL3A1P02461 AL118496.1-201ENST00000440201 1812 ntBASIC3.99□□□□□ -1.77
COL3A1P02461 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
COL3A1P02461 SNRPEP3-201ENST00000338402 276 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 Y_RNA.132-201ENST00000363421 102 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 Y_RNA.159-201ENST00000363674 87 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 U3.11-201ENST00000364476 212 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 SNORA71.1-201ENST00000364523 117 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL3A1P02461 RNU6-463P-201ENST00000384340 107 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 SNORA46-201ENST00000384762 135 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL3A1P02461 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.98□□□□□ -1.77
COL3A1P02461 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.98□□□□□ -1.77
COL3A1P02461 CACYBPP1-201ENST00000438592 684 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.98□□□□□ -1.77
COL3A1P02461 IPO7P1-201ENST00000442031 636 ntBASIC3.98□□□□□ -1.77
COL3A1P02461 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.98□□□□□ -1.77
COL3A1P02461 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.98□□□□□ -1.77
COL3A1P02461 NDUFA5P7-201ENST00000452914 242 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms