Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC079780.1-201ENST00000428259 207 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC096644.2-201ENST00000429278 159 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 USP9YP16-201ENST00000430287 407 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.18□□□□□ -1.74
CNOT4O95628 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.18□□□□□ -1.74
CNOT4O95628 AC010655.1-201ENST00000449336 292 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AL162591.2-201ENST00000449634 317 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 ANP32BP2-201ENST00000454525 545 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 USP9YP23-201ENST00000455085 407 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 RPL23AP31-201ENST00000456160 467 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 SNRPGP3-201ENST00000469405 227 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 RPL23AP2-201ENST00000471227 466 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.18□□□□□ -1.74
CNOT4O95628 RN7SL283P-201ENST00000489055 303 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AP002812.1-201ENST00000495378 474 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.18□□□□□ -1.74
CNOT4O95628 Y_RNA.708-201ENST00000516950 96 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 RNU6-1271P-201ENST00000517049 105 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 SNRPGP16-201ENST00000533275 226 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC005868.1-201ENST00000536421 331 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.18□□□□□ -1.74
CNOT4O95628 MIR3941-201ENST00000582572 103 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.18□□□□□ -1.74
CNOT4O95628 AL354984.3-201ENST00000604803 325 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC009570.1-201ENST00000609599 745 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC006157.1-201ENST00000611750 366 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 AC010300.1-201ENST00000600671 5134 ntBASIC4.18□□□□□ -1.74
CNOT4O95628 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNOT4O95628 AL672296.1-201ENST00000427780 2158 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CNOT4O95628 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNOT4O95628 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNOT4O95628 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNOT4O95628 Y_RNA.80-201ENST00000362996 102 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.17□□□□□ -1.74
CNOT4O95628 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 RNU6-946P-201ENST00000383878 107 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RNU6-128P-201ENST00000383976 107 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CNOT4O95628 SNORA75.6-201ENST00000391318 127 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AL590762.2-201ENST00000395798 571 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RNU4-6P-201ENST00000410804 122 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RN7SKP106-201ENST00000410832 272 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RPLP0P7-201ENST00000416050 667 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 E2F6P2-201ENST00000420708 748 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RSL24D1P6-201ENST00000426934 401 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.17□□□□□ -1.74
CNOT4O95628 Z98949.2-201ENST00000440996 144 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 CECR9-201ENST00000453421 199 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 U8.20-201ENST00000459445 131 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AC128713.1-201ENST00000471495 306 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 TRBV1-201ENST00000476502 284 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 MRPS35P2-201ENST00000508242 191 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AC091868.1-201ENST00000508746 304 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 TBCAP3-201ENST00000512475 312 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RNA5SP468-201ENST00000516782 93 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 RNU6-264P-201ENST00000517134 104 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 IGKV2D-23-201ENST00000518179 286 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.17□□□□□ -1.74
CNOT4O95628 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.17□□□□□ -1.74
CNOT4O95628 MIR5692C1-201ENST00000585309 91 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
CNOT4O95628 AL138889.2-201ENST00000603883 242 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 AC009229.3-201ENST00000608056 282 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 SNHG22-203ENST00000617833 660 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNOT4O95628 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.17□□□□□ -1.74
CNOT4O95628 MAPK10-372ENST00000641954 3413 ntBASIC4.17□□□□□ -1.74
CNOT4O95628 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.16□□□□□ -1.74
CNOT4O95628 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 SMIM11P1-201ENST00000369586 178 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 DEFB109C-201ENST00000382575 264 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 DEFB109B-201ENST00000382656 264 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 Y_RNA.399-201ENST00000383955 105 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 Y_RNA.476-201ENST00000384347 108 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 RNU6-1222P-201ENST00000384615 107 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 SNORD70.1-201ENST00000391007 85 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 RNA5SP397-201ENST00000391323 118 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 RNU6-847P-201ENST00000411115 108 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 UBE2FP1-201ENST00000416536 447 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.16□□□□□ -1.74
CNOT4O95628 AC140479.3-201ENST00000418944 1126 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 EIF4HP2-201ENST00000424380 563 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms