Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 FAM106CP-201ENST00000582212 507 ntBASIC0.45□□□□□ -2.34
USH2AO75445 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
USH2AO75445 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
USH2AO75445 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
USH2AO75445 RNA5SP276-201ENST00000362580 94 ntBASIC0.44□□□□□ -2.34
USH2AO75445 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AL121871.1-201ENST00000443413 436 ntBASIC0.44□□□□□ -2.34
USH2AO75445 RPL37P6-202ENST00000464216 403 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.44□□□□□ -2.34
USH2AO75445 AC021755.4-201ENST00000616620 456 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AP002907.1-201ENST00000606361 1430 ntBASIC0.44□□□□□ -2.34
USH2AO75445 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.44□□□□□ -2.34
USH2AO75445 AC087343.1-201ENST00000477341 475 ntBASIC0.44□□□□□ -2.34
USH2AO75445 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.44□□□□□ -2.34
USH2AO75445 Y_RNA.684-201ENST00000516510 99 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.44□□□□□ -2.34
USH2AO75445 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.44□□□□□ -2.34
USH2AO75445 uc_338.22-201ENST00000622722 187 ntBASIC0.44□□□□□ -2.34
USH2AO75445 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.44□□□□□ -2.34
USH2AO75445 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
USH2AO75445 AL354685.2-201ENST00000448218 1447 ntBASIC0.44□□□□□ -2.34
USH2AO75445 SNORA4.3-201ENST00000365564 137 ntBASIC0.44□□□□□ -2.34
USH2AO75445 RNU6-452P-201ENST00000384406 107 ntBASIC0.44□□□□□ -2.34
USH2AO75445 SUMO2P12-201ENST00000405924 140 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC007098.1-201ENST00000420122 367 ntBASIC0.44□□□□□ -2.34
USH2AO75445 MORF4L1P7-201ENST00000426038 703 ntBASIC0.44□□□□□ -2.34
USH2AO75445 GDI2P2-201ENST00000445131 608 ntBASIC0.44□□□□□ -2.34
USH2AO75445 CFTRP1-201ENST00000456646 183 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC067942.3-201ENST00000512025 362 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.44□□□□□ -2.34
USH2AO75445 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.44□□□□□ -2.34
USH2AO75445 VTA1P2-201ENST00000520205 911 ntBASIC0.44□□□□□ -2.34
USH2AO75445 HSPE1P20-201ENST00000538133 289 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC108706.1-201ENST00000611053 297 ntBASIC0.44□□□□□ -2.34
USH2AO75445 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.44□□□□□ -2.34
USH2AO75445 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.44□□□□□ -2.34
USH2AO75445 RNA5SP57-201ENST00000459463 123 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.44□□□□□ -2.34
USH2AO75445 AC083923.1-201ENST00000523708 376 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC068446.3-201ENST00000555285 382 ntBASIC0.44□□□□□ -2.34
USH2AO75445 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.44□□□□□ -2.34
USH2AO75445 AC005156.1-201ENST00000613371 573 ntBASIC0.44□□□□□ -2.34
USH2AO75445 MFSD8-213ENST00000641134 1327 ntBASIC0.44□□□□□ -2.34
USH2AO75445 RNU6-942P-201ENST00000363002 107 ntBASIC0.43□□□□□ -2.34
USH2AO75445 SNORD114-3-201ENST00000364969 75 ntBASIC0.43□□□□□ -2.34
USH2AO75445 MIR601-201ENST00000385256 79 ntBASIC0.43□□□□□ -2.34
USH2AO75445 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.43□□□□□ -2.34
USH2AO75445 uc_338.20-201ENST00000621563 178 ntBASIC0.43□□□□□ -2.34
USH2AO75445 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
USH2AO75445 Y_RNA.453-201ENST00000384223 109 ntBASIC0.43□□□□□ -2.34
USH2AO75445 UBE2V1P9-201ENST00000414760 368 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC099336.2-201ENST00000422457 254 ntBASIC0.43□□□□□ -2.34
USH2AO75445 UBE2FP3-201ENST00000436366 524 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.43□□□□□ -2.34
USH2AO75445 AC090096.1-201ENST00000489168 390 ntBASIC0.43□□□□□ -2.34
USH2AO75445 SUMO2P4-201ENST00000504193 276 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC006213.5-201ENST00000619673 288 ntBASIC0.43□□□□□ -2.34
USH2AO75445 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
USH2AO75445 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
USH2AO75445 MIR153-2-201ENST00000385225 87 ntBASIC0.43□□□□□ -2.34
USH2AO75445 RNU11-5P-201ENST00000391216 129 ntBASIC0.43□□□□□ -2.34
USH2AO75445 RNA5SP498-201ENST00000411342 120 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.43□□□□□ -2.34
USH2AO75445 AL357078.2-201ENST00000416486 427 ntBASIC0.43□□□□□ -2.34
USH2AO75445 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.43□□□□□ -2.34
USH2AO75445 PSMA2P3-201ENST00000429685 675 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC092451.1-201ENST00000480211 153 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.43□□□□□ -2.34
USH2AO75445 AC090617.7-201ENST00000623952 126 ntBASIC0.43□□□□□ -2.34
USH2AO75445 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
USH2AO75445 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.43□□□□□ -2.34
USH2AO75445 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
USH2AO75445 RNU1-109P-201ENST00000383960 147 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.43□□□□□ -2.34
USH2AO75445 AC026801.1-201ENST00000497178 464 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.43□□□□□ -2.34
USH2AO75445 IGLVI-20-201ENST00000519296 130 ntBASIC0.43□□□□□ -2.34
USH2AO75445 AC125611.2-201ENST00000551907 647 ntBASIC0.43□□□□□ -2.34
USH2AO75445 RPL23AP88-201ENST00000605759 454 ntBASIC0.43□□□□□ -2.34
USH2AO75445 Pinc.1-201ENST00000616452 154 ntBASIC0.43□□□□□ -2.34
USH2AO75445 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.43□□□□□ -2.34
USH2AO75445 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
USH2AO75445 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.42□□□□□ -2.34
USH2AO75445 AC090515.1-201ENST00000465295 476 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC012181.1-201ENST00000479895 423 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC087808.1-201ENST00000520501 361 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.42□□□□□ -2.34
USH2AO75445 AL133393.1-201ENST00000603277 287 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AP000811.1-201ENST00000603803 651 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AL050343.2-201ENST00000607338 280 ntBASIC0.42□□□□□ -2.34
USH2AO75445 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.42□□□□□ -2.34
USH2AO75445 C2orf27A-204ENST00000623058 969 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC116618.1-201ENST00000634617 774 ntBASIC0.42□□□□□ -2.34
USH2AO75445 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
USH2AO75445 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms