Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX4O60224 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX4O60224 AC093106.2-201ENST00000428212 385 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC007919.1-201ENST00000429380 217 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL589823.1-201ENST00000429577 183 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RPS20P22-201ENST00000473700 357 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC004924.1-201ENST00000480160 781 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RN7SL432P-201ENST00000484057 298 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU6-927P-201ENST00000516199 100 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU7-51P-201ENST00000516560 62 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU6-405P-201ENST00000516637 110 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNU6-1092P-201ENST00000516955 87 ntBASIC3.11□□□□□ -1.91
SSX4O60224 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
SSX4O60224 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SSX4O60224 HMGB1P41-201ENST00000520234 440 ntBASIC3.11□□□□□ -1.91
SSX4O60224 OR5G4P-201ENST00000525251 760 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AP006587.4-201ENST00000526053 529 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX4O60224 AC087883.1-201ENST00000551882 391 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC005951.1-201ENST00000576706 485 ntBASIC3.11□□□□□ -1.91
SSX4O60224 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.6-201ENST00000603753 252 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.11-201ENST00000604059 253 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC008162.1-201ENST00000604718 254 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.1-201ENST00000604752 252 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.5-201ENST00000605253 252 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.12-201ENST00000605291 253 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL136363.1-201ENST00000605349 337 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.8-201ENST00000605353 252 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL670379.7-201ENST00000605823 252 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AL139286.2-201ENST00000606838 396 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC104073.3-201ENST00000610942 955 ntBASIC3.11□□□□□ -1.91
SSX4O60224 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX4O60224 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX4O60224 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX4O60224 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.11□□□□□ -1.91
SSX4O60224 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX4O60224 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX4O60224 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX4O60224 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 AC007823.1-201ENST00000569932 1566 ntBASIC3.1□□□□□ -1.91
SSX4O60224 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
SSX4O60224 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 SNORD9-201ENST00000362566 104 ntBASIC3.1□□□□□ -1.91
SSX4O60224 RNU6-188P-201ENST00000364207 107 ntBASIC3.1□□□□□ -1.91
SSX4O60224 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
SSX4O60224 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.1□□□□□ -1.91
SSX4O60224 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.1□□□□□ -1.91
SSX4O60224 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX4O60224 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
SSX4O60224 OR2AS1P-201ENST00000427827 319 ntBASIC3.1□□□□□ -1.91
SSX4O60224 RPS24P1-201ENST00000438550 371 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC079448.1-201ENST00000449377 373 ntBASIC3.1□□□□□ -1.91
SSX4O60224 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.1□□□□□ -1.91
SSX4O60224 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX4O60224 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX4O60224 MTCO2P4-201ENST00000517968 247 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.1□□□□□ -1.91
SSX4O60224 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX4O60224 RPS3AP4-201ENST00000555161 764 ntBASIC3.1□□□□□ -1.91
SSX4O60224 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.1□□□□□ -1.91
SSX4O60224 AGGF1P4-201ENST00000568249 801 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX4O60224 GLUD1P4-201ENST00000590914 418 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC079089.3-201ENST00000603094 673 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC073648.5-201ENST00000603502 305 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AP002360.4-201ENST00000606980 481 ntBASIC3.1□□□□□ -1.91
SSX4O60224 Z99129.1-201ENST00000612510 255 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC005332.10-201ENST00000612725 619 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AL442067.2-201ENST00000614033 363 ntBASIC3.1□□□□□ -1.91
SSX4O60224 MIR6076-201ENST00000617521 113 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC099842.1-201ENST00000619919 596 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AL589994.2-201ENST00000621124 579 ntBASIC3.1□□□□□ -1.91
SSX4O60224 AC068137.4-201ENST00000638485 296 ntBASIC3.1□□□□□ -1.91
SSX4O60224 OR5H6-203ENST00000642105 978 ntBASIC3.1□□□□□ -1.91
SSX4O60224 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX4O60224 AL079305.1-201ENST00000623159 3008 ntBASIC3.1□□□□□ -1.91
SSX4O60224 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
SSX4O60224 AC007496.3-201ENST00000624987 3443 ntBASIC3.09□□□□□ -1.91
SSX4O60224 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX4O60224 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SSX4O60224 SMIM11P1-201ENST00000369586 178 ntBASIC3.09□□□□□ -1.91
SSX4O60224 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
SSX4O60224 MIR490-201ENST00000384865 128 ntBASIC3.09□□□□□ -1.91
SSX4O60224 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSX4O60224 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX4O60224 ZNF90P2-204ENST00000419323 1075 ntBASIC3.09□□□□□ -1.91
SSX4O60224 PIGFP2-201ENST00000421400 651 ntBASIC3.09□□□□□ -1.91
SSX4O60224 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX4O60224 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms