Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC009961.3-201ENST00000449832 765 ntBASIC3.02□□□□□ -1.93
RTCAO00442 MTCO1P42-201ENST00000457379 726 ntBASIC3.02□□□□□ -1.93
RTCAO00442 RNA5SP269-201ENST00000459032 137 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.02□□□□□ -1.93
RTCAO00442 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 AC055855.1-201ENST00000489563 579 ntBASIC3.02□□□□□ -1.93
RTCAO00442 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
RTCAO00442 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.02□□□□□ -1.93
RTCAO00442 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
RTCAO00442 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 SNORA31.18-201ENST00000517043 134 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC025881.1-201ENST00000518851 512 ntBASIC3.02□□□□□ -1.93
RTCAO00442 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.02□□□□□ -1.93
RTCAO00442 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 MIR5697-201ENST00000578045 78 ntBASIC3.02□□□□□ -1.93
RTCAO00442 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 AC010620.1-201ENST00000601088 1102 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC024220.1-201ENST00000603675 484 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AL161734.1-201ENST00000609720 557 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC008498.1-201ENST00000613012 531 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SDR42E1P2-201ENST00000614861 481 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC010133.1-201ENST00000615809 842 ntBASIC3.02□□□□□ -1.93
RTCAO00442 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTCAO00442 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RTCAO00442 SNORA63.1-201ENST00000362493 131 ntBASIC3.01□□□□□ -1.93
RTCAO00442 RNA5SP72-201ENST00000364442 117 ntBASIC3.01□□□□□ -1.93
RTCAO00442 RN7SKP226-201ENST00000364912 300 ntBASIC3.01□□□□□ -1.93
RTCAO00442 RNU5E-5P-201ENST00000365379 116 ntBASIC3.01□□□□□ -1.93
RTCAO00442 RNU6-432P-201ENST00000384196 109 ntBASIC3.01□□□□□ -1.93
RTCAO00442 SNORD116-1-201ENST00000384335 95 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC110754.1-201ENST00000399740 601 ntBASIC3.01□□□□□ -1.93
RTCAO00442 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
RTCAO00442 Y_RNA.608-201ENST00000410647 95 ntBASIC3.01□□□□□ -1.93
RTCAO00442 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC078974.1-201ENST00000411597 223 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.01□□□□□ -1.93
RTCAO00442 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 GTF2IP20-201ENST00000431663 360 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.01□□□□□ -1.93
RTCAO00442 RPS15AP7-201ENST00000439294 405 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.01□□□□□ -1.93
RTCAO00442 RPL31P3-201ENST00000458430 332 ntBASIC3.01□□□□□ -1.93
RTCAO00442 KC877373.1-201ENST00000479066 408 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AL160314.1-201ENST00000490836 438 ntBASIC3.01□□□□□ -1.93
RTCAO00442 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.01□□□□□ -1.93
RTCAO00442 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.01□□□□□ -1.93
RTCAO00442 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
RTCAO00442 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.01□□□□□ -1.93
RTCAO00442 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.01□□□□□ -1.93
RTCAO00442 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.01□□□□□ -1.93
RTCAO00442 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 AC004908.2-201ENST00000609090 574 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC025594.3-201ENST00000613068 790 ntBASIC3.01□□□□□ -1.93
RTCAO00442 TUG1_2.1-201ENST00000614234 87 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AC034102.8-201ENST00000615146 484 ntBASIC3.01□□□□□ -1.93
RTCAO00442 AL137003.2-201ENST00000606924 2538 ntBASIC3.01□□□□□ -1.93
RTCAO00442 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RTCAO00442 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTCAO00442 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
RTCAO00442 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTCAO00442 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTCAO00442 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.01□□□□□ -1.93
RTCAO00442 ELL2P3-201ENST00000457883 1602 ntBASIC3.01□□□□□ -1.93
RTCAO00442 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
RTCAO00442 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3□□□□□ -1.93
RTCAO00442 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3□□□□□ -1.93
RTCAO00442 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
RTCAO00442 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3□□□□□ -1.93
RTCAO00442 SET-203ENST00000372688 801 ntTSL 2 BASIC3□□□□□ -1.93
RTCAO00442 MIR19A-201ENST00000384878 82 ntBASIC3□□□□□ -1.93
RTCAO00442 RPS20P2-201ENST00000402520 389 ntBASIC3□□□□□ -1.93
RTCAO00442 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3□□□□□ -1.93
RTCAO00442 USP9YP13-201ENST00000417797 480 ntBASIC3□□□□□ -1.93
RTCAO00442 AL158156.1-201ENST00000422509 473 ntBASIC3□□□□□ -1.93
RTCAO00442 AC091390.3-201ENST00000426478 338 ntBASIC3□□□□□ -1.93
RTCAO00442 MTND2P22-201ENST00000444325 1033 ntBASIC3□□□□□ -1.93
RTCAO00442 COX6CP12-201ENST00000446748 202 ntBASIC3□□□□□ -1.93
RTCAO00442 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3□□□□□ -1.93
RTCAO00442 AC013267.1-201ENST00000458227 267 ntBASIC3□□□□□ -1.93
RTCAO00442 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
RTCAO00442 MRPS17P3-201ENST00000465453 385 ntBASIC3□□□□□ -1.93
RTCAO00442 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
RTCAO00442 AC116347.2-201ENST00000514912 523 ntBASIC3□□□□□ -1.93
RTCAO00442 AC022878.1-201ENST00000530684 149 ntBASIC3□□□□□ -1.93
RTCAO00442 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3□□□□□ -1.93
RTCAO00442 AC005951.2-201ENST00000576282 495 ntBASIC3□□□□□ -1.93
RTCAO00442 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
RTCAO00442 SRGNP1-201ENST00000603392 451 ntBASIC3□□□□□ -1.93
RTCAO00442 AC136601.2-201ENST00000604356 474 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms