Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNA5SP384-201ENST00000516615 116 ntBASIC1.51□□□□□ -2.17
RGPD3A6NKT7 AC087854.1-201ENST00000519706 414 ntBASIC1.51□□□□□ -2.17
RGPD3A6NKT7 HSBP1P1-201ENST00000555205 166 ntBASIC1.51□□□□□ -2.17
RGPD3A6NKT7 AC107214.2-201ENST00000608204 634 ntBASIC1.51□□□□□ -2.17
RGPD3A6NKT7 AP001486.3-201ENST00000615334 372 ntBASIC1.51□□□□□ -2.17
RGPD3A6NKT7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 RNY1P4-201ENST00000384595 115 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 AC005534.2-201ENST00000431047 433 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RGPD3A6NKT7 AC023825.1-201ENST00000566704 1030 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 AC233266.2-201ENST00000567067 528 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 VN1R107P-201ENST00000601784 209 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 SDR42E1P2-201ENST00000614861 481 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.5□□□□□ -2.17
RGPD3A6NKT7 RNA5SP465-201ENST00000391195 109 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 RNA5SP498-201ENST00000411342 120 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AL356379.1-201ENST00000414105 126 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC009296.1-201ENST00000443146 155 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC105252.1-201ENST00000503089 286 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 HMGB1P22-201ENST00000505315 124 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC110792.2-201ENST00000510278 224 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 RNA5SP436-201ENST00000516020 115 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 NDUFS5P6-201ENST00000529136 295 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 MIR3117-201ENST00000584034 78 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 U73023.1-201ENST00000603134 700 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 SNRPEP10-201ENST00000420249 274 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AL591212.2-201ENST00000433923 257 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC022447.3-201ENST00000506865 495 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AL391834.1-201ENST00000609609 560 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC020658.4-201ENST00000613987 684 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC015726.3-201ENST00000624501 418 ntBASIC1.49□□□□□ -2.17
RGPD3A6NKT7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RGPD3A6NKT7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
RGPD3A6NKT7 MIR1250-201ENST00000408098 113 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 MTND5P25-201ENST00000430499 799 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 AC015908.1-201ENST00000478739 476 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 HMGB3P17-201ENST00000504195 649 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 SNORA31.8-201ENST00000516327 108 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 CR383656.8-201ENST00000549046 145 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 AC008127.2-201ENST00000549925 1075 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RGPD3A6NKT7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RGPD3A6NKT7 MIR4714-201ENST00000580728 77 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 MIR3616-201ENST00000584070 92 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 AC098657.3-201ENST00000620434 263 ntBASIC1.48□□□□□ -2.17
RGPD3A6NKT7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
RGPD3A6NKT7 RNA5SP354-201ENST00000391247 136 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 MIR1285-1-201ENST00000408593 84 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 XKRYP1-201ENST00000423438 492 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 XKRYP2-201ENST00000432915 492 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 SNORA51.12-201ENST00000384448 134 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AL445305.1-201ENST00000432577 575 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 SDCBPP1-201ENST00000440192 890 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AL360221.1-201ENST00000445989 335 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AC111188.2-201ENST00000529697 1387 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.47□□□□□ -2.17
RGPD3A6NKT7 AC112191.3-201ENST00000604371 277 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 HMGB1P24-202ENST00000615653 685 ntBASIC1.47□□□□□ -2.17
RGPD3A6NKT7 SGO1P2-201ENST00000429458 1589 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 SNORA3A-201ENST00000364113 130 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 RNU6-882P-201ENST00000391025 103 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 UBE2V1P6-201ENST00000430840 422 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 MTCYBP34-201ENST00000439552 670 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 PSPHP1-201ENST00000450062 261 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AC025918.2-201ENST00000558683 763 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AL020996.3-201ENST00000606617 222 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AL161423.1-201ENST00000613700 262 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AC011330.2-201ENST00000621680 635 ntBASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.46□□□□□ -2.18
RGPD3A6NKT7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms