Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC087883.1-201ENST00000551882 391 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL163153.1-201ENST00000554223 283 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL391840.1-201ENST00000571144 367 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MIR3167-201ENST00000579623 85 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 NRBF2P1-201ENST00000587407 859 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 XIAPP1-201ENST00000603162 600 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL442067.2-201ENST00000614033 363 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AL157817.1-201ENST00000614264 790 ntBASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX9Q9Y5X1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 SNORA38.1-201ENST00000364172 131 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 RNU6-55P-201ENST00000411092 107 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 RNU6-954P-201ENST00000411355 107 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 FTH1P1-201ENST00000437933 532 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC132479.1-201ENST00000449160 144 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC109927.2-201ENST00000506416 303 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC105914.1-201ENST00000511798 226 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 RNU6-528P-201ENST00000516926 100 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC011602.1-201ENST00000546484 331 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 MIR3146-201ENST00000580367 79 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 MIR5195-201ENST00000583555 115 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 SNORD84-203ENST00000584275 78 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AP001029.3-201ENST00000588063 596 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AL161756.2-201ENST00000604597 246 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 U4.5-201ENST00000617137 123 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC009268.2-201ENST00000621925 457 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AL356585.4-201ENST00000623078 1229 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 AC118273.1-201ENST00000525324 3006 ntBASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX9Q9Y5X1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RNU6-282P-201ENST00000365357 103 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RNU6-805P-201ENST00000365643 106 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC012498.1-201ENST00000424037 437 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC019097.1-201ENST00000424783 735 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RPL31P35-201ENST00000431058 377 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 MTCO2P11-201ENST00000431069 680 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 UBE2V1P8-201ENST00000437166 265 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 MTATP6P13-201ENST00000438531 667 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 FGF7P6-202ENST00000451282 293 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 C1DP4-201ENST00000455429 424 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RPS3AP14-201ENST00000483907 780 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 RPL23AP41-201ENST00000484754 458 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 HMGB1P29-201ENST00000505659 499 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC010587.1-201ENST00000505809 469 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AP000907.2-201ENST00000530827 353 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 CR383656.7-201ENST00000548164 174 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 ZNF519P2-201ENST00000557032 169 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC245014.2-201ENST00000603689 287 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms