Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RNU2-33P-201ENST00000410344 192 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RN7SKP140-201ENST00000411196 284 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AL365184.2-201ENST00000431139 435 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RPS6P15-201ENST00000431996 751 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 USP12PX-201ENST00000432383 1057 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC244505.4-201ENST00000434905 287 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 SSXP5-201ENST00000443473 287 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RNU7-59P-201ENST00000459101 61 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 RPL30P6-201ENST00000475925 342 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC055855.1-201ENST00000489563 579 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AP000857.1-201ENST00000532151 543 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AL133153.1-201ENST00000557756 303 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 H3F3AP1-201ENST00000559984 334 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC011471.1-201ENST00000585766 187 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AP000403.1-201ENST00000603349 851 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AL136363.1-201ENST00000605349 337 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AC093591.3-201ENST00000634516 308 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AP003122.5-201ENST00000527668 3766 ntBASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATG4BQ9Y4P1 AL035425.3-201ENST00000564206 4996 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 API5P2-201ENST00000397055 1498 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RNU5F-6P-201ENST00000362979 116 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-270P-201ENST00000364131 105 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-217P-201ENST00000384164 104 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 MIR325-201ENST00000385260 98 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL365203.2-201ENST00000423444 196 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RPL35AP12-201ENST00000425362 338 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC092447.3-201ENST00000426027 686 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 CETN4P-201ENST00000432407 469 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RPL22P17-201ENST00000438729 315 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL512286.1-201ENST00000439244 400 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL714022.1-201ENST00000439897 151 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RPL21P2-201ENST00000440049 481 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RPL37P4-201ENST00000448908 268 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC116337.2-201ENST00000477662 156 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 RPF2P2-201ENST00000504693 896 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC022080.3-201ENST00000544433 482 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC109446.2-201ENST00000567872 497 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL451007.1-201ENST00000595491 289 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AP001981.2-201ENST00000603241 418 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL355472.4-201ENST00000610233 626 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC004852.3-201ENST00000614131 326 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AL161629.2-201ENST00000615347 275 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 AC007494.3-201ENST00000624660 743 ntBASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4BQ9Y4P1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC078974.1-201ENST00000411597 223 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 RPL21P24-201ENST00000413752 448 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 BMS1P22-201ENST00000414726 313 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AL365496.1-201ENST00000426885 215 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC109583.1-201ENST00000432156 268 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 MTND1P26-201ENST00000440488 538 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 ELOCP30-201ENST00000447108 299 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 KATNBL1P6-201ENST00000453433 915 ntBASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4BQ9Y4P1 AC013267.1-201ENST00000458227 267 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms