Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR7106-201ENST00000612419 65 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC010678.1-201ENST00000614118 713 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AL356421.1-201ENST00000403255 413 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 RPL26P27-201ENST00000414397 437 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 ARL5AP4-201ENST00000430731 512 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 MTCO2P25-201ENST00000447065 681 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 MTATP6P7-201ENST00000453315 681 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 RNA5SP290-201ENST00000517133 127 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 LRRC6P1-201ENST00000532188 885 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC005832.3-201ENST00000537929 631 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 MRPS36P5-201ENST00000551909 298 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AC093673.2-201ENST00000609674 331 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
RHBDD3Q9Y3P4 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 SNORA80A-201ENST00000363922 136 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RNU1-39P-201ENST00000383897 165 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-224P-201ENST00000384055 107 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-432P-201ENST00000384196 109 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-114P-201ENST00000384704 105 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 Z92545.1-201ENST00000411782 234 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 BX119904.4-201ENST00000424402 301 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 MTND5P14-201ENST00000441481 1267 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC096576.1-201ENST00000489014 359 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RPS29P20-201ENST00000489592 171 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RPS27AP10-201ENST00000496103 208 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC113347.3-201ENST00000509113 148 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-927P-201ENST00000516199 100 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 OR5BN1P-201ENST00000532955 829 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 MIR3199-1-201ENST00000582434 88 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC104237.2-201ENST00000612456 443 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AP003400.5-201ENST00000624827 617 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 MIR3199-2-201ENST00000636243 86 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 MTND5P29-201ENST00000458676 1807 ntBASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RHBDD3Q9Y3P4 AC011477.1-204ENST00000623416 1325 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 RNA5SP456-201ENST00000364002 114 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 RNU4-51P-201ENST00000364206 140 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 MIR34A-201ENST00000385130 110 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AL139039.1-201ENST00000401900 692 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AL590084.1-201ENST00000407885 387 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 OR4K6P-201ENST00000416478 897 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC063976.3-201ENST00000426849 329 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC128713.1-201ENST00000471495 306 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 TRBV1-201ENST00000476502 284 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC079203.1-201ENST00000487972 404 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 RNA5SP402-201ENST00000517148 110 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 OR4R2P-201ENST00000530815 597 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AGGF1P5-201ENST00000567900 919 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 MIR4319-201ENST00000577285 85 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AL021997.1-201ENST00000605757 193 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 AC092608.2-201ENST00000624427 218 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 MTND4P35-201ENST00000604257 1375 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 DDX43P2-201ENST00000604753 1354 ntBASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RHBDD3Q9Y3P4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms