Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL160413.1-201ENST00000622780 310 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 MIR492-201ENST00000638676 116 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 MIR383-201ENST00000362257 73 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.167-201ENST00000363735 109 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.474-201ENST00000384341 102 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AL139396.1-201ENST00000421137 167 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 OR4C10P-201ENST00000434991 931 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AF228730.2-201ENST00000438784 848 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 HMGB3P11-201ENST00000440127 604 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AL645939.1-201ENST00000453429 797 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 RNU7-66P-201ENST00000459469 62 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 RNU6-273P-201ENST00000516937 96 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC135001.1-201ENST00000544546 283 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 MIR5692A1-201ENST00000580523 69 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AL591034.3-201ENST00000605511 685 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 MIR15A-201ENST00000607334 83 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC107294.1-201ENST00000609524 467 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 OR4G2P-202ENST00000641004 1759 ntBASIC4.93□□□□□ -1.62
DDX41Q9UJV9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.93□□□□□ -1.62
DDX41Q9UJV9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNU6-1252P-201ENST00000363054 104 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNU1-63P-201ENST00000383902 164 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MIR1302-11-201ENST00000408051 138 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MIR1302-9-201ENST00000408365 138 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MIR1302-10-201ENST00000408734 138 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNA5SP317-201ENST00000410176 116 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RN7SKP177-201ENST00000410567 355 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNA5SP311-201ENST00000411290 116 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RPL21P66-201ENST00000426566 466 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC107399.1-201ENST00000451226 265 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 HMGB3P22-202ENST00000451823 572 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.635-201ENST00000459041 101 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 DYNLL1P5-201ENST00000467158 270 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AP000926.1-201ENST00000479573 241 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 SNORA31.8-201ENST00000516327 108 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNA5SP315-201ENST00000516340 116 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNA5SP49-201ENST00000516450 115 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RNA5SP312-201ENST00000517068 116 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RPL23AP87-202ENST00000573039 466 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC005255.1-201ENST00000593748 216 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 HMGB1P50-201ENST00000605814 607 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MIR1302-2-201ENST00000607096 138 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC064836.2-201ENST00000609491 462 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 AL133216.2-202ENST00000634512 349 ntBASIC4.92□□□□□ -1.62
DDX41Q9UJV9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms