Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RMST_3.1-201ENST00000611651 109 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 uc_338.12-201ENST00000616344 181 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AL136221.1-201ENST00000621449 509 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC010338.1-201ENST00000621823 717 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AF127577.6-201ENST00000623352 2191 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 RNU5A-1-201ENST00000362698 116 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 RNY1P12-201ENST00000364251 105 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC068050.1-201ENST00000394891 380 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 RPL21P65-201ENST00000406094 466 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 ELOCP4-201ENST00000420090 333 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC007283.2-201ENST00000424739 197 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC137499.1-201ENST00000427602 88 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 TIMM9P1-201ENST00000436122 256 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC016691.1-201ENST00000441321 413 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 RPL21P89-201ENST00000444021 467 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC079781.2-201ENST00000446424 169 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 MRPS31P2-201ENST00000451581 518 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AL136097.1-201ENST00000456945 913 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 MIR3160-1-201ENST00000577972 85 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AL592436.1-201ENST00000605135 558 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AL136363.1-201ENST00000605349 337 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC245517.5-201ENST00000611529 162 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC010133.1-201ENST00000615809 842 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC093648.1-201ENST00000623546 606 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AC024614.3-201ENST00000637860 256 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP25Q9UHP3 AP001148.1-201ENST00000624124 2359 ntBASIC4.29□□□□□ -1.72
USP25Q9UHP3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP25Q9UHP3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP25Q9UHP3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.29□□□□□ -1.72
USP25Q9UHP3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP25Q9UHP3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP25Q9UHP3 RNU6-1158P-201ENST00000391167 107 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 MIR1290-201ENST00000408735 78 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 RN7SKP159-201ENST00000410657 292 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 RNU2-62P-201ENST00000410868 191 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 OR9R1P-201ENST00000412200 877 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 RPS15AP12-201ENST00000419498 388 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 MTND1P14-201ENST00000427400 950 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 AL606489.2-201ENST00000433886 234 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 RPS15AP9-201ENST00000439856 381 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC093156.1-201ENST00000440382 670 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP25Q9UHP3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 RPS20P20-201ENST00000460498 340 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 HSPE1P6-201ENST00000479457 291 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 UBE2CP3-201ENST00000502715 450 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 RNU1-61P-201ENST00000516107 151 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 SYF2P1-201ENST00000550658 413 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC034105.3-201ENST00000565294 442 ntBASIC4.28□□□□□ -1.72
USP25Q9UHP3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP25Q9UHP3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
USP25Q9UHP3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.28□□□□□ -1.73
USP25Q9UHP3 MTND4P23-201ENST00000447723 1363 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 ZNF680P1-201ENST00000436625 1469 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms