Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC090617.7-201ENST00000623952 126 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC093591.3-201ENST00000634516 308 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MIR4275-201ENST00000636486 87 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 MIR135A2-201ENST00000384854 100 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 RNU6-1242P-201ENST00000391052 103 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 SSR1P2-201ENST00000415208 787 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC092427.1-202ENST00000430569 476 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 MTND5P14-201ENST00000441481 1267 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AL606517.1-201ENST00000446914 387 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC002381.1-201ENST00000447049 280 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 USP9YP25-201ENST00000457708 443 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC004263.1-201ENST00000479327 332 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC091057.2-201ENST00000602594 792 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AL450336.1-201ENST00000605180 586 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC009831.4-201ENST00000620744 325 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AL078595.3-201ENST00000623815 1166 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 AC011477.1-204ENST00000623416 1325 ntBASIC3.1□□□□□ -1.91
NPC1L1Q9UHC9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NPC1L1Q9UHC9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-97P-201ENST00000363387 104 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 SNORA14A-201ENST00000364773 135 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC083875.1-201ENST00000419509 405 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC024082.2-201ENST00000434771 238 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL353705.4-201ENST00000449661 238 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC093281.2-201ENST00000510153 597 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL359273.1-201ENST00000510918 627 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 RNA5SP281-201ENST00000516504 135 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC023050.2-201ENST00000544968 387 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 SNRPGP18-201ENST00000553000 214 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 OR4K8P-201ENST00000578842 1048 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL391001.1-201ENST00000602747 715 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL158042.1-201ENST00000605338 460 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-88P-201ENST00000606801 100 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC002550.2-201ENST00000621246 394 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AP003122.6-201ENST00000623831 495 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AL160394.1-201ENST00000624765 724 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 AC005832.2-201ENST00000538921 1430 ntBASIC3.09□□□□□ -1.92
NPC1L1Q9UHC9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL21P75-201ENST00000396599 483 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL21P28-201ENST00000401418 483 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AL592114.1-201ENST00000403842 483 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AL096701.2-201ENST00000416920 238 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AL592447.1-201ENST00000447592 540 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL21P39-201ENST00000463605 483 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL21P93-201ENST00000480465 489 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL30P14-201ENST00000482744 348 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC233702.1-201ENST00000482905 502 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC093591.1-201ENST00000491435 481 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RPL21P16-201ENST00000495531 483 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC092436.1-201ENST00000506450 503 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-528P-201ENST00000516926 100 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 RNU6-714P-201ENST00000516963 103 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 MTCO2P15-201ENST00000532655 656 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC015712.3-201ENST00000559380 164 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AL596327.1-201ENST00000603629 213 ntBASIC3.08□□□□□ -1.92
NPC1L1Q9UHC9 AC104237.2-201ENST00000612456 443 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms