Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MTND5P29-201ENST00000458676 1807 ntBASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COMMD3Q9UBI1 MTND4P23-201ENST00000447723 1363 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 ENSAP3-201ENST00000312710 333 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AL355615.1-201ENST00000406187 641 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 RN7SKP158-201ENST00000410453 326 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 RNA5SP508-201ENST00000411327 119 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC074117.2-201ENST00000417130 397 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 RPL7P54-201ENST00000438336 674 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 RPS26P30-201ENST00000443431 335 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC080013.2-201ENST00000460866 323 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 MIR4285-201ENST00000581001 85 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 HMGN2P15-201ENST00000585707 270 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC109454.4-201ENST00000623411 649 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AP003400.6-201ENST00000624698 740 ntBASIC1.34□□□□□ -2.19
COMMD3Q9UBI1 AC092881.1-201ENST00000638218 2733 ntBASIC1.34□□□□□ -2.2
COMMD3Q9UBI1 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.2
COMMD3Q9UBI1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 Z98749.2-208ENST00000381646 500 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RN7SKP223-201ENST00000410582 62 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 PNRC2P1-201ENST00000423940 420 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL445669.1-201ENST00000426743 755 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 VN1R108P-201ENST00000431580 830 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 FAM103A2P-201ENST00000444122 354 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RPL7P36-201ENST00000444633 681 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 DDX3P2-201ENST00000446138 111 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC005297.2-201ENST00000450430 606 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 USP9YP10-201ENST00000454868 628 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC025181.1-201ENST00000477507 416 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC093767.1-201ENST00000504523 156 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC010486.1-201ENST00000511793 424 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RNA5SP182-201ENST00000516064 82 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RNU6-970P-201ENST00000516312 107 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 SCARNA3-201ENST00000517097 143 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 HSPE1P18-201ENST00000517602 280 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AP005639.2-201ENST00000527592 928 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL021997.1-201ENST00000605757 193 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC087241.4-201ENST00000612441 480 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC064859.1-201ENST00000624741 174 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 ZNF702P-202ENST00000434269 1966 ntBASIC1.33□□□□□ -2.2
COMMD3Q9UBI1 AC104454.1-201ENST00000421341 1401 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC006026.1-201ENST00000444025 1803 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 SNORA23-201ENST00000365128 182 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 SNORA40.18-201ENST00000391200 128 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC023141.4-201ENST00000412031 328 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 BX510359.4-201ENST00000423750 193 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC096920.1-201ENST00000423991 241 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 RPS3AP44-201ENST00000425466 790 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 Z93242.1-201ENST00000427102 353 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AL139415.2-201ENST00000431968 163 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 HSPE1P21-201ENST00000438283 308 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 RPL23AP63-201ENST00000498752 471 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC008121.1-201ENST00000603244 268 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AC008498.1-201ENST00000613012 531 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms