Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC026801.2-201ENST00000515352 425 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC109635.4-202ENST00000531666 412 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC005668.1-201ENST00000571142 476 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC004696.1-201ENST00000614345 607 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 FRG1KP-201ENST00000623592 341 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AL133216.2-202ENST00000634512 349 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AP004289.2-201ENST00000444413 1457 ntBASIC3.83□□□□□ -1.8
EHD3Q9NZN3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.83□□□□□ -1.8
EHD3Q9NZN3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 RNU6-960P-201ENST00000364056 120 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SOD2P1-201ENST00000396543 562 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 HSPE1P12-201ENST00000412576 301 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 OR6C66P-201ENST00000414917 930 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AL137014.1-201ENST00000420490 1226 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 MTCO3P45-201ENST00000443036 613 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SNRPFP3-201ENST00000457792 225 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AC100870.1-201ENST00000522035 505 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 RN7SL600P-201ENST00000581811 299 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 AL450472.3-201ENST00000615578 367 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SNHG22-203ENST00000617833 660 ntBASIC3.82□□□□□ -1.8
EHD3Q9NZN3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
EHD3Q9NZN3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 SMIM11P1-201ENST00000369586 178 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 snosnR66.1-201ENST00000391095 99 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 RAB28P1-201ENST00000411517 641 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC099677.1-201ENST00000420575 175 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 ATP5HP2-201ENST00000433885 485 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 CYCSP43-201ENST00000438233 310 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 HMGB1P18-201ENST00000438801 619 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 RN7SL860P-201ENST00000473738 223 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 RPS27AP1-201ENST00000475545 471 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 CCDC34P1-201ENST00000507441 517 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 PARP1P2-201ENST00000556806 195 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 MIR5047-201ENST00000579212 100 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AF038458.1-201ENST00000588406 262 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AC005498.1-201ENST00000592125 465 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AL591034.3-201ENST00000605511 685 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 AP001486.3-201ENST00000615334 372 ntBASIC3.81□□□□□ -1.8
EHD3Q9NZN3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
EHD3Q9NZN3 uc_338.34-201ENST00000617467 174 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms