Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 DUTP6-201ENST00000425573 462 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 YME1L1P1-201ENST00000429435 297 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 C8orf59P1-201ENST00000429930 303 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 HMGB1P15-201ENST00000453854 435 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 HMGB1P25-201ENST00000468402 607 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC004062.1-201ENST00000509926 645 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AP003497.1-201ENST00000528472 562 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC022878.1-201ENST00000530684 149 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AL355836.1-201ENST00000555951 870 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC074050.1-201ENST00000563247 211 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 MIR4474-201ENST00000579189 78 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC005046.1-201ENST00000608515 625 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC008498.1-201ENST00000613012 531 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC091925.2-201ENST00000625059 256 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 RNU6-50P-201ENST00000362356 103 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 RNU6-28P-201ENST00000362378 107 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 SNORD21-201ENST00000383953 95 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 RNU6-878P-201ENST00000384578 110 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MTATP6P27-201ENST00000416987 621 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC005300.1-201ENST00000428401 373 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 SDCBPP1-201ENST00000440192 890 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC244505.5-201ENST00000443639 207 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 RPL7P52-201ENST00000449200 742 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 RPS4XP10-201ENST00000465034 731 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MTND1P5-201ENST00000517906 940 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MTND4LP18-201ENST00000526864 291 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AL121603.1-201ENST00000553815 142 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 HMGN1P30-201ENST00000589286 268 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC012150.2-201ENST00000621300 544 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AC040168.1-201ENST00000623594 991 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 CR381653.2-201ENST00000624041 768 ntBASIC3.42□□□□□ -1.86
UPF2Q9HAU5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF2Q9HAU5 MTND5P33-201ENST00000571250 1450 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AL136164.4-201ENST00000625013 2135 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC092447.10-201ENST00000620607 1652 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 MIR7-3-201ENST00000384898 110 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 Y_RNA.598-201ENST00000410480 95 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 RPS3AP3-201ENST00000411933 242 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC005326.1-201ENST00000429197 123 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 MTND1P4-201ENST00000435196 415 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 MTND6P13-201ENST00000443510 523 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 RPS20P24-201ENST00000457473 361 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 KLF3P2-201ENST00000465138 268 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 RPL32P34-201ENST00000486380 400 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 LARP1BP2-201ENST00000486594 519 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC138853.1-201ENST00000503549 823 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC098799.2-201ENST00000509466 868 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 CDC42P4-201ENST00000510507 563 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 RNU6-714P-201ENST00000516963 103 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AP003181.2-201ENST00000528941 181 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC024220.1-201ENST00000603675 484 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC108747.1-201ENST00000609508 535 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC091304.9-201ENST00000612091 226 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC018755.4-201ENST00000619715 454 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 AC244100.1-202ENST00000621554 382 ntBASIC3.41□□□□□ -1.86
UPF2Q9HAU5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms