Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-1148P-201ENST00000410992 104 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 NCOR1P3-201ENST00000420479 303 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 RBMY1KP-201ENST00000423480 476 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 OR4C10P-201ENST00000434991 931 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 TAAR7P-201ENST00000436141 242 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 RNU6-329P-201ENST00000459618 107 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC010469.1-201ENST00000463864 576 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC103851.1-201ENST00000506833 274 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 RNU6-189P-201ENST00000516120 101 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 SNORA70.16-201ENST00000516390 95 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 MYL12AP1-201ENST00000518490 515 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC011611.1-201ENST00000552179 197 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 MIR4742-201ENST00000581069 85 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC008638.3-201ENST00000603341 463 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC106900.2-201ENST00000604994 317 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AL592436.1-201ENST00000605135 558 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC087045.1-201ENST00000605856 382 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC103710.3-201ENST00000608157 948 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC006023.2-201ENST00000609916 167 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 AC068724.3-201ENST00000625906 87 ntBASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC113Q9H0I3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 USP8P1-201ENST00000494673 3183 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU1-15P-201ENST00000353977 144 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP502-201ENST00000362694 119 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU4-73P-201ENST00000363164 141 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU6-512P-201ENST00000364438 103 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP515-201ENST00000364570 118 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU6-715P-201ENST00000365204 103 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU6-831P-201ENST00000384548 107 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP219-201ENST00000390940 113 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MIR1179-201ENST00000408703 91 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP129-201ENST00000410276 118 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AL356095.1-201ENST00000417217 199 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 USP9YP20-201ENST00000419224 558 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 HLA-N-201ENST00000437516 135 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AF228730.2-201ENST00000438784 848 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 PRPS1P1-201ENST00000445305 876 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MRPL50P4-201ENST00000446432 475 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RPS29P19-201ENST00000479709 171 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC068587.1-201ENST00000483613 781 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AF213884.1-201ENST00000488102 463 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MTCO3P9-201ENST00000506989 781 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC104136.1-201ENST00000512969 394 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC112206.3-201ENST00000514578 389 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNU6-914P-201ENST00000516749 109 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 IFITM8P-201ENST00000522529 394 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AP001804.3-201ENST00000525146 880 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 OR5D17P-201ENST00000531492 978 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 OR11H5P-201ENST00000554039 926 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC026464.5-201ENST00000562497 722 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MIR3160-1-201ENST00000577972 85 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MIR5692A1-201ENST00000580523 69 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AC007687.1-201ENST00000602704 304 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AP003400.5-201ENST00000624827 617 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RNA5SP196-201ENST00000625967 102 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 TPTEP1-208ENST00000636884 213 ntBASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC113Q9H0I3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms