Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC114755.2-201ENST00000413520 361 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 YPEL5P1-201ENST00000419731 367 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 RPL21P109-201ENST00000422213 475 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC005019.1-201ENST00000436455 431 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 RPL23AP89-201ENST00000439324 255 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC087884.1-201ENST00000469738 328 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC117503.1-201ENST00000472241 394 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC103987.1-201ENST00000473394 348 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 MTCO1P29-201ENST00000496868 288 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 RNU6-1069P-201ENST00000516612 133 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC133555.2-201ENST00000550213 292 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 MIR4715-201ENST00000584117 79 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 MIR3672-201ENST00000584290 82 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 MIR5692C1-201ENST00000585309 91 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC022726.1-201ENST00000587475 207 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC093227.2-201ENST00000589357 285 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC008638.3-201ENST00000603341 463 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 FAM157A-202ENST00000615155 405 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AL133243.3-201ENST00000617415 3004 ntBASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM55Q9BYV6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 RHOT1P2-201ENST00000366423 333 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 RNU1-82P-201ENST00000390851 165 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 RNU6-1197P-201ENST00000391183 107 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC004552.1-201ENST00000419089 348 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 Z82210.1-201ENST00000440037 231 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 RPS26P3-201ENST00000470205 348 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC090543.2-201ENST00000483963 348 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC004057.1-201ENST00000485827 348 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC022493.1-201ENST00000492984 337 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 MTND3P25-201ENST00000509243 135 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 PARP1P2-201ENST00000556806 195 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 MIR4277-201ENST00000578298 84 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 AC053481.4-201ENST00000583164 216 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 SNORD39.4-201ENST00000620099 78 ntBASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM55Q9BYV6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RNU1-15P-201ENST00000353977 144 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.33-201ENST00000362591 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.58-201ENST00000362807 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.154-201ENST00000363624 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RNU4-76P-201ENST00000364509 141 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RNY3P1-201ENST00000365085 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RNY3-201ENST00000365484 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RNU6-395P-201ENST00000365662 106 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.490-201ENST00000384413 102 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 MIR325-201ENST00000385260 98 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 U3.30-201ENST00000391308 210 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 MIR450B-201ENST00000401182 78 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AL158156.1-201ENST00000422509 473 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 HLA-N-201ENST00000437516 135 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AC233279.1-201ENST00000455300 423 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 MTND4P17-201ENST00000470444 350 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 RPS4XP13-201ENST00000483219 789 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AC008716.1-201ENST00000511084 513 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.682-201ENST00000516457 100 ntBASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM55Q9BYV6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms