Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC007967.1-201ENST00000455422 1159 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC026784.1-201ENST00000507986 352 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 RNU6-397P-201ENST00000516226 104 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 RNU6-390P-201ENST00000516259 103 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AP003733.2-201ENST00000529409 171 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AL110118.1-201ENST00000553543 400 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC090517.1-201ENST00000569307 266 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC012433.1-201ENST00000588916 398 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC234771.5-201ENST00000600161 514 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AL355812.1-201ENST00000603215 216 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 ELOCP5-201ENST00000604924 333 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC002044.1-201ENST00000606707 158 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 FTX_2.1-201ENST00000618816 94 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AL159153.1-201ENST00000619688 317 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 AC107027.3-201ENST00000565095 3473 ntBASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSBP3Q9BWW4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC139713.2-215ENST00000641428 5037 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC079741.1-201ENST00000321498 212 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 Y_RNA.29-201ENST00000362570 113 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RNA5SP443-201ENST00000363083 132 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 SNORD27-201ENST00000363981 72 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 SNORA71.2-201ENST00000364941 134 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 Y_RNA.416-201ENST00000384014 113 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RNU6-790P-201ENST00000384479 105 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 Y_RNA.518-201ENST00000384552 113 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RNU1-82P-201ENST00000390851 165 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RN7SKP267-201ENST00000410381 285 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RNU6-174P-201ENST00000410406 106 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 MTCO3P19-201ENST00000415864 321 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RAC1P3-201ENST00000416129 580 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RPS15AP40-201ENST00000419621 391 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RPL10P17-201ENST00000453852 316 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC010326.1-201ENST00000462726 602 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC006463.2-201ENST00000473326 348 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC022795.1-201ENST00000473808 480 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RNU6-897P-201ENST00000517135 105 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AL390123.1-201ENST00000603216 237 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 AC006971.1-201ENST00000407916 4486 ntBASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSBP3Q9BWW4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 IQCB2P-201ENST00000401788 1633 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RNY1P16-201ENST00000363063 111 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RNY3P11-201ENST00000364153 102 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RNU6-746P-201ENST00000384112 109 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 Z98745.1-201ENST00000402553 494 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RN7SKP216-201ENST00000411050 312 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 AL133396.1-201ENST00000432048 687 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 CYCSP43-201ENST00000438233 310 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 H2AFZP5-201ENST00000446960 382 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RPL7L1P1-201ENST00000448259 785 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RPS3AP46-201ENST00000448352 682 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 TPT1P13-201ENST00000449760 499 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 ZFRP1-201ENST00000457579 2970 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 snoU109.4-201ENST00000458953 143 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RNU7-169P-201ENST00000459456 61 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 RN7SL354P-201ENST00000469282 294 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 VN1R105P-201ENST00000486595 910 ntBASIC3.93□□□□□ -1.78
SSBP3Q9BWW4 MTCO3P44-201ENST00000510977 541 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms