Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AP001486.2-201ENST00000561652 5113 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 RNU1-17P-201ENST00000363022 152 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 RNU6-621P-201ENST00000364752 109 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 SNORA26.9-201ENST00000391322 122 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRUQ92729 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRUQ92729 RAC1P7-201ENST00000445367 377 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 BX322784.1-201ENST00000455793 1077 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRUQ92729 MEMO1P3-201ENST00000459811 302 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 FAM92A1P2-202ENST00000504766 877 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AC105914.1-201ENST00000511798 226 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AC135628.1-201ENST00000568867 534 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 OR4K8P-201ENST00000578842 1048 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 RNU6-88P-201ENST00000606801 100 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRUQ92729 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AL590099.1-201ENST00000615276 138 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AL596245.1-201ENST00000618994 362 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AC091046.2-201ENST00000620775 665 ntBASIC3.1□□□□□ -1.91
PTPRUQ92729 AC010733.2-201ENST00000589496 5702 ntBASIC3.09□□□□□ -1.91
PTPRUQ92729 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPRUQ92729 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRUQ92729 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRUQ92729 OR5H15-201ENST00000383696 930 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 MIR320C1-201ENST00000408566 88 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 CCDC58P2-201ENST00000417131 366 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 MTCYBP38-201ENST00000417160 1123 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AL953862.1-201ENST00000423016 168 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AC009414.1-201ENST00000427200 443 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRUQ92729 RPS25P9-201ENST00000435591 252 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRUQ92729 FGF7P5-201ENST00000441829 291 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 SNORD11.1-201ENST00000459482 85 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.09□□□□□ -1.92
PTPRUQ92729 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRUQ92729 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRUQ92729 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.09□□□□□ -1.92
PTPRUQ92729 OR6C7P-201ENST00000547875 934 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRUQ92729 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.09□□□□□ -1.92
PTPRUQ92729 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRUQ92729 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRUQ92729 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRUQ92729 AC105148.1-201ENST00000604961 409 ntBASIC3.09□□□□□ -1.92
PTPRUQ92729 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPRUQ92729 MTND5P7-201ENST00000413558 1798 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRUQ92729 AC009487.4-201ENST00000624969 3585 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRUQ92729 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPRUQ92729 Y_RNA.140-201ENST00000363474 103 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 RNU6-1155P-201ENST00000363554 107 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 RPL23AP29-201ENST00000397284 453 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AL136372.1-201ENST00000403060 228 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRUQ92729 MTCO2P21-201ENST00000419780 677 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 MTND5P14-201ENST00000441481 1267 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AC072039.1-201ENST00000477611 581 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 RNU5A-4P-201ENST00000516588 111 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AP003467.2-201ENST00000520175 319 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AC245517.5-201ENST00000611529 162 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PTPRUQ92729 AP000484.1-201ENST00000620067 1252 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AC009831.4-201ENST00000620744 325 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 AC011330.2-201ENST00000621680 635 ntBASIC3.08□□□□□ -1.92
PTPRUQ92729 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRUQ92729 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PTPRUQ92729 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPRUQ92729 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPRUQ92729 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPRUQ92729 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PTPRUQ92729 ZNF876P-202ENST00000398732 1485 ntBASIC3.07□□□□□ -1.92
PTPRUQ92729 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRUQ92729 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.07□□□□□ -1.92
PTPRUQ92729 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRUQ92729 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRUQ92729 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PTPRUQ92729 AL591034.1-201ENST00000407447 340 ntBASIC3.07□□□□□ -1.92
PTPRUQ92729 AL139156.1-201ENST00000412785 841 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms