Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC009963.2-201ENST00000453431 138 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 RNU7-152P-201ENST00000458982 64 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC090136.1-201ENST00000520009 240 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 APOOP3-201ENST00000536787 586 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL080274.1-201ENST00000605565 220 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 Z82243.1-201ENST00000609432 473 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC090510.2-201ENST00000617465 629 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 MTND4P27-201ENST00000450813 1354 ntBASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.48□□□□□ -1.85
NANOGP1Q8N7R0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNY4P36-201ENST00000391116 96 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 PTMAP5-201ENST00000393073 333 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 SPTLC1P2-201ENST00000407089 121 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MIR548F5-201ENST00000408421 86 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNA5SP56-201ENST00000410277 118 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNU6-516P-201ENST00000411381 104 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 OR6C66P-201ENST00000414917 930 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC245054.2-201ENST00000415639 319 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC119751.6-201ENST00000416712 186 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC068533.1-201ENST00000418542 415 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC005517.2-201ENST00000424673 553 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RPL36AP6-201ENST00000435770 321 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RANP8-201ENST00000444720 713 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RPS29P31-201ENST00000446147 164 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 SNRPFP3-201ENST00000457792 225 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 SNORD108-201ENST00000459332 71 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC068587.1-201ENST00000483613 781 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MTCO1P29-201ENST00000496868 288 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MTND4P7-201ENST00000523876 130 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 COPS8P3-201ENST00000526024 482 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AL137161.1-201ENST00000532231 390 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 NCAPGP2-201ENST00000557911 754 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 MIR3672-201ENST00000584290 82 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LLPHP1-201ENST00000603571 367 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 AP000942.4-201ENST00000604811 241 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 USP8P1-201ENST00000494673 3183 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 PRO1804-201ENST00000623780 2050 ntBASIC3.47□□□□□ -1.85
NANOGP1Q8N7R0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NANOGP1Q8N7R0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 SNORA33.2-201ENST00000365413 134 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.46□□□□□ -1.86
NANOGP1Q8N7R0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms