Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC110792.1-201ENST00000491826 472 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX5Q8N196 RNA5SP230-201ENST00000517039 122 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 RNU6-570P-201ENST00000517051 105 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 RNU6-897P-201ENST00000517135 105 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX5Q8N196 ATP5F1P5-201ENST00000526403 760 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AL110118.1-201ENST00000553543 400 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX5Q8N196 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX5Q8N196 MIR1254-2-201ENST00000579553 63 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 MIR4472-2-201ENST00000582069 67 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 RNA5SP108-201ENST00000605921 117 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SIX5Q8N196 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX5Q8N196 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX5Q8N196 MTND5P6-201ENST00000422338 1798 ntBASIC5.29□□□□□ -1.56
SIX5Q8N196 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX5Q8N196 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIX5Q8N196 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX5Q8N196 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC032011.1-201ENST00000611703 1549 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 Y_RNA.26-201ENST00000362539 101 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 RNU6-806P-201ENST00000365147 105 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 SNORD56.6-201ENST00000384569 71 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX5Q8N196 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 HMGB1P35-201ENST00000503360 598 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 AC007016.1-201ENST00000512110 244 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
SIX5Q8N196 MIR8076-201ENST00000611401 83 ntBASIC5.28□□□□□ -1.56
SIX5Q8N196 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SIX5Q8N196 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.28□□□□□ -1.56
SIX5Q8N196 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIX5Q8N196 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.28□□□□□ -1.56
SIX5Q8N196 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SIX5Q8N196 Y_RNA.245-201ENST00000364493 95 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SIX5Q8N196 MIR548I3-201ENST00000408378 149 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 MIR548I1-201ENST00000408810 149 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 RNA5SP113-201ENST00000410486 84 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 RN7SKP27-201ENST00000410684 333 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 RNU2-64P-201ENST00000411315 191 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 SNORD56-201ENST00000413522 71 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX5Q8N196 AC099670.2-201ENST00000435130 321 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.27□□□□□ -1.57
SIX5Q8N196 RPS20P22-201ENST00000473700 357 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 TRBVB-201ENST00000477100 408 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 SNORA31.20-201ENST00000517111 133 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 IGKV1-32-201ENST00000519290 311 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AP003733.2-201ENST00000529409 171 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 HMGB2P1-201ENST00000591146 634 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.27□□□□□ -1.57
SIX5Q8N196 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AC083843.3-201ENST00000623679 2186 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 MIR6715B-201ENST00000637172 77 ntBASIC5.27□□□□□ -1.57
SIX5Q8N196 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SIX5Q8N196 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SIX5Q8N196 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX5Q8N196 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX5Q8N196 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms