Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 HSPE1P7-201ENST00000604681 321 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL360219.1-201ENST00000610230 366 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC012150.2-201ENST00000621300 544 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 OR5H6-203ENST00000642105 978 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SKA3Q8IX90 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RNU6-799P-201ENST00000363567 107 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RNU6-809P-201ENST00000384461 107 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 MIR19A-201ENST00000384878 82 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 MIR512-1-201ENST00000384913 84 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 MIR325-201ENST00000385260 98 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 RNA5SP252-201ENST00000391131 119 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 FO393413.1-201ENST00000402892 195 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 CCNG1P1-201ENST00000406783 885 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SKA3Q8IX90 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RPS27AP14-201ENST00000422868 454 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RPL23AP83-201ENST00000434984 473 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 MTCO3P45-201ENST00000443036 613 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC009237.8-201ENST00000445492 379 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 NIPA2P5-201ENST00000452282 464 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RPS15AP36-201ENST00000492022 382 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 SEM1P1-201ENST00000506694 209 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 MRPS33P3-201ENST00000513456 322 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AP000857.1-201ENST00000532151 543 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AP000867.2-201ENST00000532468 320 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC090616.2-202ENST00000584248 222 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AF038458.1-201ENST00000588406 262 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AL451007.1-201ENST00000595491 289 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC093732.2-201ENST00000607950 274 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC007038.2-201ENST00000608095 740 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC090115.4-201ENST00000609970 188 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AC091304.6-201ENST00000619761 202 ntBASIC2.5□□□□□ -2.01
SKA3Q8IX90 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SKA3Q8IX90 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SKA3Q8IX90 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 RPL9P7-201ENST00000330965 580 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SKA3Q8IX90 RNU6-223P-201ENST00000362830 107 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 RNU5F-6P-201ENST00000362979 116 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 BX682237.1-201ENST00000415016 335 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC234781.2-201ENST00000426370 994 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 GDI2P2-201ENST00000445131 608 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 ZNF114P1-201ENST00000453500 292 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 MTCO1P42-201ENST00000457379 726 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AL135752.1-201ENST00000479477 471 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC055855.1-201ENST00000489563 579 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC080014.1-201ENST00000496877 1201 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SKA3Q8IX90 DSTNP2-201ENST00000504533 515 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC116347.2-201ENST00000514912 523 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 SCARNA13-201ENST00000516672 275 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 RPL23AP84-201ENST00000571193 464 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC068790.3-201ENST00000602988 553 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC005000.2-201ENST00000605468 310 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC018638.7-201ENST00000605836 1114 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AL355472.4-201ENST00000610233 626 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC093838.1-201ENST00000613014 469 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC013476.2-201ENST00000614456 459 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 SDR42E1P2-201ENST00000614861 481 ntBASIC2.49□□□□□ -2.01
SKA3Q8IX90 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.49□□□□□ -2.01
SKA3Q8IX90 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.48□□□□□ -2.01
SKA3Q8IX90 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SKA3Q8IX90 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms