Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 RNU2-52P-201ENST00000410680 190 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC003982.1-202ENST00000469928 248 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC135721.1-201ENST00000497954 479 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC117522.3-201ENST00000507974 584 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 HMGN1P28-201ENST00000521340 364 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 DEFB108D-201ENST00000527787 222 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 MIR548AB-201ENST00000584917 84 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC068790.3-201ENST00000602988 553 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AP001981.2-201ENST00000603241 418 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 OR2AS2P-201ENST00000606902 342 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AL603758.1-201ENST00000618654 241 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AL159972.1-201ENST00000625150 448 ntBASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
CCDC60Q8IWA6 MAPK10-362ENST00000641864 4484 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 Y_RNA.46-201ENST00000362695 102 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 RNU5A-1-201ENST00000362698 116 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 SNORD116-2-201ENST00000384274 95 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 SNORD116-6-201ENST00000384711 96 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 RNA5SP184-201ENST00000411071 108 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC078974.1-201ENST00000411597 223 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 UBE2FP1-201ENST00000416536 447 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 COX6CP12-201ENST00000446748 202 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC006483.1-201ENST00000487308 313 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC055855.1-201ENST00000489563 579 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 Y_RNA.688-201ENST00000516565 95 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 SNORA31.22-201ENST00000517204 135 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 RNU6-840P-201ENST00000517275 65 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC060788.1-201ENST00000521318 469 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 HPRT1P3-201ENST00000539521 576 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 MIR3162-201ENST00000581818 82 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC083760.1-201ENST00000589621 670 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AL590229.1-201ENST00000603497 542 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AL035413.2-201ENST00000604801 525 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC012360.2-201ENST00000609349 391 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
CCDC60Q8IWA6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.09□□□□□ -1.92
CCDC60Q8IWA6 DDX10P1-201ENST00000448545 1933 ntBASIC3.09□□□□□ -1.92
CCDC60Q8IWA6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC60Q8IWA6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC60Q8IWA6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL079305.1-201ENST00000623159 3008 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 RNY4P24-201ENST00000362735 96 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MIR19A-201ENST00000384878 82 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MIR493-201ENST00000385254 89 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 FAT1P1-201ENST00000406588 507 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MIR1302-8-201ENST00000408342 128 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 RNA5SP21-201ENST00000410917 96 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MTND1P21-201ENST00000412991 285 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 RPL17P12-201ENST00000413391 526 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms