Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 COX6CP3-201ENST00000580869 223 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC105224.1-201ENST00000587055 421 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC110760.3-201ENST00000598794 467 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC012065.4-201ENST00000602445 679 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AL590229.1-201ENST00000603497 542 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC106900.2-201ENST00000604994 317 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC004908.2-201ENST00000609090 574 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AL355472.4-201ENST00000610233 626 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC027807.2-201ENST00000616099 408 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC007998.5-201ENST00000622938 237 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC099506.2-201ENST00000623074 221 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 LRRC77P-213ENST00000637727 880 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 SDAD1P2-201ENST00000441308 2028 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 AC090740.1-201ENST00000623193 2262 ntBASIC2.81□□□□□ -1.96
CCDC71Q8IV32 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCDC71Q8IV32 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RNU5E-5P-201ENST00000365379 116 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RNU6-533P-201ENST00000384144 107 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 SNORA7.4-201ENST00000384249 137 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RNU6-809P-201ENST00000384461 107 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 SNORA26.8-201ENST00000391306 124 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL21P75-201ENST00000396599 483 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL21P28-201ENST00000401418 483 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL592114.1-201ENST00000403842 483 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL7P10-201ENST00000417407 739 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 CYCSP46-201ENST00000423569 204 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC244035.1-201ENST00000430042 390 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC022018.1-201ENST00000430685 241 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC098826.1-201ENST00000433943 471 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL592447.1-201ENST00000447592 540 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL21P39-201ENST00000463605 483 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL21P93-201ENST00000480465 489 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC233702.1-201ENST00000482905 502 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC087190.1-201ENST00000484462 480 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC093591.1-201ENST00000491435 481 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RPL21P16-201ENST00000495531 483 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 SNORA70.16-201ENST00000516390 95 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 RNU6-711P-201ENST00000517255 106 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 ERHP1-201ENST00000523006 310 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AP000907.2-201ENST00000530827 353 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AP000857.1-201ENST00000532151 543 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL133153.1-201ENST00000557756 303 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 MIR5697-201ENST00000578045 78 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 TUG1_2.1-201ENST00000614234 87 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AL603758.1-201ENST00000618654 241 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 CU459211.1-201ENST00000635667 749 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
CCDC71Q8IV32 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC71Q8IV32 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 RNU4-91P-201ENST00000364778 135 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 SNORD116-2-201ENST00000384274 95 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 SNORA36C-201ENST00000384289 132 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 SNORD116-6-201ENST00000384711 96 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 MIR1290-201ENST00000408735 78 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 Y_RNA.608-201ENST00000410647 95 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 YPEL5P1-201ENST00000419731 367 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC71Q8IV32 UBE2D3P2-201ENST00000424409 445 ntBASIC2.79□□□□□ -1.96
CCDC71Q8IV32 AL353777.1-201ENST00000425552 326 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms