Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SNORD81.2-201ENST00000365153 76 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 Y_RNA.373-201ENST00000365600 103 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 Y_RNA.378-201ENST00000365652 113 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 RNA5SP39-201ENST00000411245 120 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 PDCL2P1-201ENST00000419302 352 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AL591704.1-201ENST00000432574 275 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC091390.1-201ENST00000433904 331 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 RPS4XP13-201ENST00000483219 789 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 Y_RNA.654-201ENST00000497848 106 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 RANP9-201ENST00000519957 271 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC022690.1-201ENST00000526681 550 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ZNF192P1-203ENST00000565888 810 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC136624.4-201ENST00000573044 370 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AC104662.1-201ENST00000604448 511 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 AL445567.2-201ENST00000618935 498 ntBASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.24□□□□□ -1.73
ATP13A4Q4VNC1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 RPL32P3-201ENST00000359025 275 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 U3.12-201ENST00000364498 214 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 SNORA70.2-201ENST00000364506 135 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 RN7SKP32-201ENST00000410167 303 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 RNA5SP104-201ENST00000410989 118 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AL160275.3-201ENST00000423876 471 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC091390.3-201ENST00000426478 338 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 IFNA20P-201ENST00000436840 528 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AF228730.2-201ENST00000438784 848 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC069285.2-201ENST00000440210 275 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 RPS15AP27-201ENST00000449183 343 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 UQCRHP4-201ENST00000471686 272 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 FAM206BP-201ENST00000510179 541 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 RNU6-1256P-201ENST00000516539 103 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC106782.4-201ENST00000568264 210 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 VN1R80P-201ENST00000597126 338 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 MIR15A-201ENST00000607334 83 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATP13A4Q4VNC1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AL672296.1-201ENST00000427780 2158 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 UBE2L2-201ENST00000254302 429 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 Y_RNA.61-201ENST00000362835 102 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AL139039.1-201ENST00000401900 692 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 BX842559.1-201ENST00000419615 532 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AC011742.1-201ENST00000431448 434 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AL365400.1-201ENST00000431854 640 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 HMGB3P22-202ENST00000451823 572 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 RPL37P6-201ENST00000460682 294 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 RPS20P22-201ENST00000473700 357 ntBASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.22□□□□□ -1.73
ATP13A4Q4VNC1 TTC39CP1-201ENST00000512513 755 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms