Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.08□□□□□ -1.92
SMC1AQ14683 RNU6-150P-201ENST00000516237 95 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 SUB1P1-201ENST00000524415 382 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 DEFB131D-201ENST00000526803 184 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 COX6CP5-201ENST00000527162 228 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 MTCO2P15-201ENST00000532655 656 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC1AQ14683 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.08□□□□□ -1.92
SMC1AQ14683 AC025281.1-201ENST00000567026 265 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC024560.3-201ENST00000608482 349 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC245517.5-201ENST00000611529 162 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AP000484.1-201ENST00000620067 1252 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC010338.1-201ENST00000621823 717 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 AC023510.2-201ENST00000622162 746 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC1AQ14683 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC1AQ14683 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SMC1AQ14683 CCT4P2-201ENST00000233836 1548 ntBASIC3.08□□□□□ -1.92
SMC1AQ14683 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
SMC1AQ14683 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SMC1AQ14683 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 RNU1-39P-201ENST00000383897 165 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.07□□□□□ -1.92
SMC1AQ14683 DPPA3P1-201ENST00000448050 469 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AL162389.1-201ENST00000449233 177 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 NIPA2P5-201ENST00000452282 464 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 SNORD109B-201ENST00000458961 67 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 SNORD109A-201ENST00000459128 67 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC021382.1-201ENST00000483523 359 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC114786.4-201ENST00000508771 728 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC114781.4-201ENST00000513707 639 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC114797.1-201ENST00000514003 728 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 CYCSP2-201ENST00000558168 301 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC061975.8-201ENST00000587058 721 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC1AQ14683 AC010149.2-201ENST00000637608 315 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 AC006927.4-201ENST00000639187 543 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMC1AQ14683 DDX10P1-201ENST00000448545 1933 ntBASIC3.07□□□□□ -1.92
SMC1AQ14683 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMC1AQ14683 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SMC1AQ14683 RNU6-461P-201ENST00000364195 107 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AL109755.1-201ENST00000401791 649 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMC1AQ14683 RNU6-757P-201ENST00000410334 100 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 RPL7P8-201ENST00000411964 730 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 USP9YP33-201ENST00000412220 421 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 OOSP1P1-201ENST00000423265 274 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.06□□□□□ -1.92
SMC1AQ14683 USP9YP35-201ENST00000435696 412 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC1AQ14683 MTND5P14-201ENST00000441481 1267 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 RPL37P4-201ENST00000448908 268 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 MTND1P9-201ENST00000453775 944 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 ATG12P2-201ENST00000456830 416 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 SNORD11.1-201ENST00000459482 85 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AP001025.2-201ENST00000490908 477 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 AC104090.1-201ENST00000506341 1171 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 TBCAP3-201ENST00000512475 312 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 AC034159.1-201ENST00000513885 583 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 RNA5SP471-201ENST00000516971 106 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SMC1AQ14683 HMGB1P41-201ENST00000520234 440 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.06□□□□□ -1.92
SMC1AQ14683 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC1AQ14683 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.06□□□□□ -1.92
SMC1AQ14683 AC079600.2-201ENST00000550076 130 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 MTND1P24-201ENST00000552175 861 ntBASIC3.06□□□□□ -1.92
SMC1AQ14683 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC1AQ14683 AL353997.4-201ENST00000586196 166 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms