Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UBE3AQ05086 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
UBE3AQ05086 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 SNORD56.2-201ENST00000363242 71 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 Y_RNA.318-201ENST00000365131 97 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
UBE3AQ05086 RNU6-1119P-201ENST00000384349 108 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 SNORA1.3-201ENST00000384676 136 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
UBE3AQ05086 AL663109.1-201ENST00000411498 844 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3AQ05086 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3AQ05086 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 MTCO2P7-201ENST00000446518 666 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.64□□□□□ -1.83
UBE3AQ05086 SNRPGP6-201ENST00000451124 220 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 RPS20P22-201ENST00000473700 357 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3AQ05086 RNU7-51P-201ENST00000516560 62 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 RN7SKP258-201ENST00000517151 304 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.64□□□□□ -1.83
UBE3AQ05086 OR5G4P-201ENST00000525251 760 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 CASP1P1-201ENST00000526345 212 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3AQ05086 DPPA3P3-201ENST00000603842 430 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AL137843.1-201ENST00000605078 385 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC073657.2-201ENST00000605661 303 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 BRDTP1-201ENST00000605735 677 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 AC098614.4-201ENST00000607601 462 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.64□□□□□ -1.83
UBE3AQ05086 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.64□□□□□ -1.83
UBE3AQ05086 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 MIR6076-201ENST00000617521 113 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBE3AQ05086 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
UBE3AQ05086 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.63□□□□□ -1.83
UBE3AQ05086 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBE3AQ05086 TPTE2P4-201ENST00000258589 1605 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.63□□□□□ -1.83
UBE3AQ05086 RPL7P26-201ENST00000333817 754 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 HSPE1P11-201ENST00000339579 310 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 Y_RNA.194-201ENST00000363985 102 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBE3AQ05086 RNU6-741P-201ENST00000383889 107 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 Y_RNA.559-201ENST00000384686 107 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 BX295541.1-201ENST00000417774 250 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 MORF4L1P6-201ENST00000418771 268 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 AL353678.1-201ENST00000422735 741 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 USP9YP36-201ENST00000424581 829 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC007919.1-201ENST00000429380 217 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.63□□□□□ -1.83
UBE3AQ05086 SETP5-201ENST00000437270 562 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.63□□□□□ -1.83
UBE3AQ05086 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 RN7SL432P-201ENST00000484057 298 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC011825.1-201ENST00000484967 388 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.63□□□□□ -1.83
UBE3AQ05086 RN7SKP298-201ENST00000515950 94 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 RNA5SP291-201ENST00000517222 105 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 AC022616.3-201ENST00000523940 148 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.63□□□□□ -1.83
UBE3AQ05086 EIF4BP1-201ENST00000554881 351 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 LARP7P3-201ENST00000579888 337 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.63□□□□□ -1.83
UBE3AQ05086 AC245014.2-201ENST00000603689 287 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC246785.4-201ENST00000605374 287 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AL589743.7-201ENST00000612637 233 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AL162274.2-201ENST00000614406 332 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC027309.3-201ENST00000623419 351 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 AC007785.2-201ENST00000598627 1916 ntBASIC3.63□□□□□ -1.83
UBE3AQ05086 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
UBE3AQ05086 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.63□□□□□ -1.83
UBE3AQ05086 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBE3AQ05086 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
UBE3AQ05086 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
UBE3AQ05086 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
UBE3AQ05086 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 RNU5E-6P-201ENST00000365574 115 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 RNU6-701P-201ENST00000384059 107 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 Y_RNA.510-201ENST00000384511 114 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBE3AQ05086 AL357075.1-201ENST00000404107 726 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 Z85995.1-201ENST00000415547 335 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 AC007390.1-201ENST00000415722 356 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE3AQ05086 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE3AQ05086 RPL31P35-201ENST00000431058 377 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 AL590664.1-201ENST00000448065 339 ntBASIC3.62□□□□□ -1.83
UBE3AQ05086 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.62□□□□□ -1.83
UBE3AQ05086 HMGB3P8-201ENST00000449709 577 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms