Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RNU6-882P-201ENST00000391025 103 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.11□□□□□ -2.23
SSBP1Q04837 RPP40P1-201ENST00000426762 456 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AL353689.1-201ENST00000438895 199 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC118469.1-201ENST00000442943 488 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.11□□□□□ -2.23
SSBP1Q04837 PABPC1P3-201ENST00000469174 459 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 RPS27P23-201ENST00000487608 251 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC109464.2-201ENST00000510242 943 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SSBP1Q04837 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.11□□□□□ -2.23
SSBP1Q04837 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.11□□□□□ -2.23
SSBP1Q04837 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SSBP1Q04837 AP005639.2-201ENST00000527592 928 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.11□□□□□ -2.23
SSBP1Q04837 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.11□□□□□ -2.23
SSBP1Q04837 AC011611.5-201ENST00000552477 578 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.11□□□□□ -2.23
SSBP1Q04837 MIR3199-1-201ENST00000582434 88 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 MIR4435-1-201ENST00000582552 80 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC021755.4-201ENST00000616620 456 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 AC090772.4-201ENST00000623599 362 ntBASIC1.11□□□□□ -2.23
SSBP1Q04837 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SSBP1Q04837 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SSBP1Q04837 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
SSBP1Q04837 MTND5P31-201ENST00000419366 1374 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 RNU6-543P-201ENST00000362576 108 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 SNORD114-1-201ENST00000362705 72 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 RNU6-1155P-201ENST00000363554 107 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 RNU4-13P-201ENST00000364019 141 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 MIR649-201ENST00000384843 97 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SSBP1Q04837 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AL590084.1-201ENST00000407885 387 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 RNA5SP508-201ENST00000411327 119 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 PAICSP7-201ENST00000419829 962 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 Z93242.1-201ENST00000427102 353 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SSBP1Q04837 AL512844.2-201ENST00000433990 593 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 Z85994.2-201ENST00000434327 452 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 HMGB1P31-201ENST00000437242 427 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AC016691.1-201ENST00000441321 413 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.1□□□□□ -2.23
SSBP1Q04837 snoU109.4-201ENST00000458953 143 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AC008481.1-201ENST00000463278 396 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 RPS15AP36-201ENST00000492022 382 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AP000926.3-201ENST00000497201 299 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SSBP1Q04837 AL359273.1-201ENST00000510918 627 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.1□□□□□ -2.23
SSBP1Q04837 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.1□□□□□ -2.23
SSBP1Q04837 HMGN2P15-201ENST00000585707 270 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AL137246.1-201ENST00000607072 977 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AC106052.1-201ENST00000608029 497 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AL592148.2-201ENST00000612210 372 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 MIR6845-201ENST00000613182 61 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.1□□□□□ -2.23
SSBP1Q04837 AC010149.2-201ENST00000637608 315 ntBASIC1.1□□□□□ -2.23
SSBP1Q04837 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSBP1Q04837 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
SSBP1Q04837 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SSBP1Q04837 DEFB108F-201ENST00000344638 222 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SSBP1Q04837 MIR150-201ENST00000385048 84 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SSBP1Q04837 RNU4-26P-201ENST00000410270 107 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AL353729.1-201ENST00000425044 720 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC024082.2-201ENST00000434771 238 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 TAAR7P-201ENST00000436141 242 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.09□□□□□ -2.23
SSBP1Q04837 MTND1P33-201ENST00000446251 917 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 RPL21P134-201ENST00000453468 483 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC005410.1-202ENST00000460347 485 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC107032.1-201ENST00000485945 480 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 MTCYBP18-201ENST00000501056 747 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC112518.2-201ENST00000508565 425 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.09□□□□□ -2.23
SSBP1Q04837 DEFB108D-201ENST00000527787 222 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC084033.1-201ENST00000550830 633 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC087465.1-201ENST00000560574 245 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 MIR3921-201ENST00000577308 85 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 MIR4529-201ENST00000578110 78 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 MIR4285-201ENST00000581001 85 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC013553.2-201ENST00000604244 589 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC010738.1-201ENST00000604970 987 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC090132.2-201ENST00000615881 347 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC006213.4-201ENST00000616184 634 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC091925.2-201ENST00000625059 256 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 AC017104.5-201ENST00000637647 639 ntBASIC1.09□□□□□ -2.23
SSBP1Q04837 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms