Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
H3F3AP84243 MTND5P29-201ENST00000458676 1807 ntBASIC1.74□□□□□ -2.13
H3F3AP84243 AP006437.1-201ENST00000641440 3685 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 RNU6-1083P-201ENST00000384022 107 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AL136133.1-201ENST00000413694 376 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.73□□□□□ -2.13
H3F3AP84243 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 Z82210.1-201ENST00000440037 231 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 BNIP3P2-201ENST00000441221 577 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC124916.1-201ENST00000444020 547 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC055731.1-201ENST00000474387 401 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.73□□□□□ -2.13
H3F3AP84243 AC112518.2-201ENST00000508565 425 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.73□□□□□ -2.13
H3F3AP84243 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H3F3AP84243 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
H3F3AP84243 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.73□□□□□ -2.13
H3F3AP84243 HMGB1P1-201ENST00000522557 636 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 OR5AQ1P-201ENST00000527596 927 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H3F3AP84243 YWHAZP1-201ENST00000556286 722 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.73□□□□□ -2.13
H3F3AP84243 LARP7P2-201ENST00000575306 125 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.73□□□□□ -2.13
H3F3AP84243 DUXAP11-201ENST00000603858 526 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.73□□□□□ -2.13
H3F3AP84243 AL021997.1-201ENST00000605757 193 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC006213.5-201ENST00000619673 288 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC025048.6-202ENST00000627667 438 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 AC110994.2-201ENST00000635481 492 ntBASIC1.73□□□□□ -2.13
H3F3AP84243 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3AP84243 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3AP84243 AC011477.1-204ENST00000623416 1325 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 RNU6-217P-201ENST00000384164 104 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 GSTA9P-201ENST00000406231 611 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 AL030996.1-201ENST00000411430 235 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 AC092047.1-201ENST00000424997 240 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 AC002542.1-201ENST00000440683 193 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 PIGFP3-201ENST00000441918 722 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.72□□□□□ -2.13
H3F3AP84243 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3F3AP84243 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 FABP5P13-201ENST00000452144 328 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 AC090453.1-201ENST00000495560 436 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 SNORA31.22-201ENST00000517204 135 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
H3F3AP84243 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.72□□□□□ -2.13
H3F3AP84243 AC025165.5-201ENST00000602802 578 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.72□□□□□ -2.13
H3F3AP84243 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 SDR42E1P2-201ENST00000614861 481 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 SDR42E1P4-201ENST00000620894 481 ntBASIC1.72□□□□□ -2.13
H3F3AP84243 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
H3F3AP84243 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
H3F3AP84243 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
H3F3AP84243 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.13
H3F3AP84243 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
H3F3AP84243 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
H3F3AP84243 RNU6-657P-201ENST00000383904 107 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 RNU6-750P-201ENST00000390946 107 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 VN1R51P-201ENST00000411675 945 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 OOSP1P1-201ENST00000423265 274 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC019178.2-201ENST00000423595 505 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC241584.1-201ENST00000438469 1241 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.71□□□□□ -2.14
H3F3AP84243 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3AP84243 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.71□□□□□ -2.14
H3F3AP84243 RPL26P9-201ENST00000457466 433 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 PMCHL2-203ENST00000457791 237 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 RPS29P20-201ENST00000489592 171 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.71□□□□□ -2.14
H3F3AP84243 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.71□□□□□ -2.14
H3F3AP84243 AC022447.3-201ENST00000506865 495 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC098591.2-201ENST00000510152 315 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3AP84243 RNU6-551P-201ENST00000516661 103 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.71□□□□□ -2.14
H3F3AP84243 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.71□□□□□ -2.14
H3F3AP84243 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3F3AP84243 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.71□□□□□ -2.14
H3F3AP84243 AC027807.1-201ENST00000559921 996 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.71□□□□□ -2.14
H3F3AP84243 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 RPAP2P1-201ENST00000603626 1168 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 AC004067.1-201ENST00000608733 700 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
H3F3AP84243 AL512506.2-201ENST00000624472 458 ntBASIC1.71□□□□□ -2.14
H3F3AP84243 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms