Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RPL31P52-201ENST00000407532 367 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 MIR1250-201ENST00000408098 113 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 USP9YP33-201ENST00000412220 421 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.79□□□□□ -2.28
PRKDCP78527 RPL31P63-201ENST00000422565 375 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC093801.2-201ENST00000503966 1050 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.79□□□□□ -2.28
PRKDCP78527 AC093281.2-201ENST00000510153 597 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC125611.2-201ENST00000551907 647 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC090616.5-202ENST00000582111 297 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 MTND4LP5-201ENST00000605152 292 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
PRKDCP78527 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PRKDCP78527 Z86062.1-201ENST00000406773 777 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.79□□□□□ -2.28
PRKDCP78527 RAB9AP5-201ENST00000437794 597 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 RAB9AP2-201ENST00000443911 597 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 Z96811.1-201ENST00000445880 108 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 RPL21P103-201ENST00000479921 488 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC114786.4-201ENST00000508771 728 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC114797.1-201ENST00000514003 728 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC087808.1-201ENST00000520501 361 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC245128.3-201ENST00000594721 748 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC113368.1-201ENST00000603736 382 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AL390240.1-201ENST00000612950 384 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC074117.2-201ENST00000417130 397 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.79□□□□□ -2.28
PRKDCP78527 DPPA3P1-201ENST00000448050 469 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 FO393415.2-201ENST00000480085 343 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.79□□□□□ -2.28
PRKDCP78527 RNU6-347P-201ENST00000516658 105 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.79□□□□□ -2.28
PRKDCP78527 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.79□□□□□ -2.28
PRKDCP78527 MIR5194-201ENST00000582634 120 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 MIR8087-201ENST00000612745 78 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 RPL7P27-201ENST00000403775 720 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 MTND4LP21-201ENST00000415303 295 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PRKDCP78527 SDCBPP1-201ENST00000440192 890 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AL353718.1-201ENST00000451028 517 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.79□□□□□ -2.28
PRKDCP78527 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PRKDCP78527 AC007742.2-201ENST00000618226 398 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC022079.2-201ENST00000619739 566 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AP003122.6-201ENST00000623831 495 ntBASIC0.79□□□□□ -2.28
PRKDCP78527 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.79□□□□□ -2.28
PRKDCP78527 RNU6-222P-201ENST00000362438 107 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 RNU1-52P-201ENST00000384190 164 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 AC010627.1-201ENST00000503819 1294 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 MTND2P17-201ENST00000550281 688 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.78□□□□□ -2.28
PRKDCP78527 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
PRKDCP78527 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PRKDCP78527 SSXP9-201ENST00000417503 292 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 JTBP1-201ENST00000441314 247 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.78□□□□□ -2.28
PRKDCP78527 RNA5SP468-201ENST00000516782 93 ntBASIC0.78□□□□□ -2.28
PRKDCP78527 MORF4L1P7-201ENST00000426038 703 ntBASIC0.78□□□□□ -2.29
PRKDCP78527 OR4V1P-201ENST00000525394 1140 ntBASIC0.78□□□□□ -2.29
PRKDCP78527 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.29
PRKDCP78527 HSPE1P14-201ENST00000605812 302 ntBASIC0.78□□□□□ -2.29
PRKDCP78527 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.78□□□□□ -2.29
PRKDCP78527 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.77□□□□□ -2.29
PRKDCP78527 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PRKDCP78527 SNORA7.2-201ENST00000364446 145 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 ARF4P4-201ENST00000439608 520 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 IPO7P1-201ENST00000442031 636 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.77□□□□□ -2.29
PRKDCP78527 RNU1-61P-201ENST00000516107 151 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 EEF1B2P4-201ENST00000551398 348 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AC140725.3-201ENST00000616193 880 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PRKDCP78527 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PRKDCP78527 RNU6-115P-201ENST00000364310 107 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AC092447.6-201ENST00000414578 210 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 MRPS36P1-201ENST00000421291 307 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.77□□□□□ -2.29
PRKDCP78527 MTCO2P9-201ENST00000503214 694 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 RNA5SP471-201ENST00000516971 106 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AP001350.1-201ENST00000601906 1524 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 RNU4-38P-201ENST00000364472 129 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
PRKDCP78527 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.77□□□□□ -2.29
PRKDCP78527 RPL30P12-201ENST00000474666 353 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AC023424.2-201ENST00000493479 777 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.77□□□□□ -2.29
PRKDCP78527 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.77□□□□□ -2.29
PRKDCP78527 AL163153.1-201ENST00000554223 283 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
PRKDCP78527 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.77□□□□□ -2.29
PRKDCP78527 MIR6759-201ENST00000638110 65 ntBASIC0.77□□□□□ -2.29
PRKDCP78527 RPL21P32-201ENST00000419877 477 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.76□□□□□ -2.29
PRKDCP78527 AC012497.1-201ENST00000429392 575 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC008962.1-201ENST00000605729 304 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 MIR6076-201ENST00000617521 113 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AC097655.1-201ENST00000635075 318 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 AL356118.1-201ENST00000635272 1078 ntBASIC0.76□□□□□ -2.29
PRKDCP78527 MIR513A1-201ENST00000385138 129 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms