Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SUMO3P55854 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SUMO3P55854 SNORA72.1-201ENST00000363485 129 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 Y_RNA.160-201ENST00000363677 92 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 RNU6-82P-201ENST00000363970 107 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SUMO3P55854 SNORA70C-201ENST00000384538 135 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 RNU6-1127P-201ENST00000384580 107 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 MIR1251-201ENST00000408552 70 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 RN7SKP53-201ENST00000411337 315 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 C4BPAP2-201ENST00000428434 478 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 TPT1P12-201ENST00000448968 492 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC012181.1-201ENST00000479895 423 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC026979.1-201ENST00000492525 396 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.72□□□□□ -1.81
SUMO3P55854 MYL12AP1-201ENST00000518490 515 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 PSMA2P1-201ENST00000526365 646 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 CENPUP1-201ENST00000526649 1202 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 CYCSP29-201ENST00000533731 318 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AC018638.8-201ENST00000588755 281 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 MIR378J-201ENST00000611988 109 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.72□□□□□ -1.81
SUMO3P55854 AL512643.1-201ENST00000635735 524 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 MIR6830-201ENST00000636015 70 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 MIR492-201ENST00000638676 116 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 MAPK10-373ENST00000641983 6772 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.72□□□□□ -1.81
SUMO3P55854 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
SUMO3P55854 AL359693.1-201ENST00000614959 2407 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SUMO3P55854 AC126755.2-208ENST00000327792 462 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC138969.1-213ENST00000331436 462 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 Y_RNA.72-201ENST00000362894 103 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 Y_RNA.86-201ENST00000363020 111 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 SNORD35B-201ENST00000363660 87 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 RNU6-371P-201ENST00000364283 108 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SUMO3P55854 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 EEF1A1P40-201ENST00000412883 573 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.71□□□□□ -1.82
SUMO3P55854 RPL21P111-201ENST00000418453 477 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC092573.2-201ENST00000434546 243 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.71□□□□□ -1.82
SUMO3P55854 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.71□□□□□ -1.82
SUMO3P55854 SNORA71B-202ENST00000439232 272 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 RPS15AP27-201ENST00000449183 343 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 RPL21P41-201ENST00000459863 264 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 HMGN2P26-201ENST00000463169 339 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 RPL7AP28-201ENST00000464513 571 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 SUMO2P6-201ENST00000505273 288 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC025465.4-201ENST00000513422 638 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 IGKV2-38-201ENST00000517443 247 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.71□□□□□ -1.82
SUMO3P55854 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
SUMO3P55854 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 AC106782.4-201ENST00000568264 210 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC025627.2-201ENST00000576220 160 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 MIR1273C-201ENST00000578669 77 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC136601.2-201ENST00000604356 474 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 AL355073.2-201ENST00000612106 557 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 AC092794.2-201ENST00000620933 563 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 AC027309.3-201ENST00000623419 351 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.71□□□□□ -1.82
SUMO3P55854 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SUMO3P55854 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.82
SUMO3P55854 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.71□□□□□ -1.82
SUMO3P55854 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
SUMO3P55854 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SUMO3P55854 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.7□□□□□ -1.82
SUMO3P55854 RPL32P3-201ENST00000359025 275 ntBASIC3.7□□□□□ -1.82
SUMO3P55854 RNU6-867P-201ENST00000364956 107 ntBASIC3.7□□□□□ -1.82
SUMO3P55854 RHOT1P2-201ENST00000366423 333 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms