Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CCT4P2-201ENST00000233836 1548 ntBASIC2.26□□□□□ -2.05
RFC3P40938 ELF2P3-201ENST00000445099 1506 ntBASIC2.26□□□□□ -2.05
RFC3P40938 AL138713.1-201ENST00000624026 2130 ntBASIC2.26□□□□□ -2.05
RFC3P40938 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.25□□□□□ -2.05
RFC3P40938 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
RFC3P40938 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.25□□□□□ -2.05
RFC3P40938 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RFC3P40938 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
RFC3P40938 RNU6-754P-201ENST00000391166 107 ntBASIC2.25□□□□□ -2.05
RFC3P40938 RNU2-33P-201ENST00000410344 192 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.25□□□□□ -2.05
RFC3P40938 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.25□□□□□ -2.05
RFC3P40938 RPL23AP76-201ENST00000441860 458 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC104389.3-201ENST00000445629 235 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC107626.1-201ENST00000471084 183 ntBASIC2.25□□□□□ -2.05
RFC3P40938 RPS15AP34-201ENST00000487776 387 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC104629.1-201ENST00000494226 508 ntBASIC2.25□□□□□ -2.05
RFC3P40938 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC008837.2-201ENST00000513076 418 ntBASIC2.25□□□□□ -2.05
RFC3P40938 RNU1-104P-201ENST00000517280 175 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AC022634.1-201ENST00000520765 532 ntBASIC2.25□□□□□ -2.05
RFC3P40938 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RFC3P40938 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.25□□□□□ -2.05
RFC3P40938 HMGN2P15-201ENST00000585707 270 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AL606834.3-201ENST00000602615 496 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AL355877.2-201ENST00000603670 358 ntBASIC2.25□□□□□ -2.05
RFC3P40938 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AL590808.1-201ENST00000618696 141 ntBASIC2.25□□□□□ -2.05
RFC3P40938 AL138955.1-201ENST00000622881 1040 ntBASIC2.25□□□□□ -2.05
RFC3P40938 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.25□□□□□ -2.05
RFC3P40938 AC064859.1-201ENST00000624741 174 ntBASIC2.25□□□□□ -2.05
RFC3P40938 CTSLP2-204ENST00000629029 392 ntBASIC2.25□□□□□ -2.05
RFC3P40938 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RFC3P40938 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFC3P40938 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.25□□□□□ -2.05
RFC3P40938 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFC3P40938 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RFC3P40938 AC011477.1-204ENST00000623416 1325 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AL139276.1-201ENST00000311910 1001 ntBASIC2.24□□□□□ -2.05
RFC3P40938 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RFC3P40938 RN7SKP226-201ENST00000364912 300 ntBASIC2.24□□□□□ -2.05
RFC3P40938 MIR1261-201ENST00000408659 82 ntBASIC2.24□□□□□ -2.05
RFC3P40938 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RFC3P40938 MTND1P21-201ENST00000412991 285 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC3P40938 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC3P40938 AC007919.1-201ENST00000429380 217 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC3P40938 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RFC3P40938 MRPS17P3-201ENST00000465453 385 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC104563.1-201ENST00000476147 376 ntBASIC2.24□□□□□ -2.05
RFC3P40938 HMGB3P3-201ENST00000510526 400 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 AC008549.1-201ENST00000512900 643 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC3P40938 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
RFC3P40938 COX6CP5-201ENST00000527162 228 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC007115.1-201ENST00000546853 234 ntBASIC2.24□□□□□ -2.05
RFC3P40938 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 CYCSP2-201ENST00000558168 301 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AL512347.1-201ENST00000566420 503 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC3P40938 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 BNIP3P26-201ENST00000600827 554 ntBASIC2.24□□□□□ -2.05
RFC3P40938 FTX_3.1-201ENST00000610451 147 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AL138478.1-201ENST00000612252 832 ntBASIC2.24□□□□□ -2.05
RFC3P40938 AC008498.1-201ENST00000613012 531 ntBASIC2.24□□□□□ -2.05
RFC3P40938 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
RFC3P40938 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC3P40938 DDX10P1-201ENST00000448545 1933 ntBASIC2.24□□□□□ -2.05
RFC3P40938 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 AC006020.1-201ENST00000420179 1854 ntBASIC2.23□□□□□ -2.05
RFC3P40938 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC3P40938 RNU1-39P-201ENST00000383897 165 ntBASIC2.23□□□□□ -2.05
RFC3P40938 RNU6-140P-201ENST00000384566 108 ntBASIC2.23□□□□□ -2.05
RFC3P40938 RNU6-114P-201ENST00000384704 105 ntBASIC2.23□□□□□ -2.05
RFC3P40938 TAS2R15P-201ENST00000390674 928 ntBASIC2.23□□□□□ -2.05
RFC3P40938 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 RN7SKP284-201ENST00000411002 343 ntBASIC2.23□□□□□ -2.05
RFC3P40938 RN7SKP140-201ENST00000411196 284 ntBASIC2.23□□□□□ -2.05
RFC3P40938 RNU6-516P-201ENST00000411381 104 ntBASIC2.23□□□□□ -2.05
RFC3P40938 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.23□□□□□ -2.05
RFC3P40938 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.23□□□□□ -2.05
RFC3P40938 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC3P40938 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.23□□□□□ -2.05
RFC3P40938 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RFC3P40938 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.23□□□□□ -2.05
RFC3P40938 UBE2D3P1-201ENST00000436669 444 ntBASIC2.23□□□□□ -2.05
RFC3P40938 AL445687.1-201ENST00000439946 251 ntBASIC2.23□□□□□ -2.05
RFC3P40938 HIGD1AP2-201ENST00000446367 280 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms