Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
LTBRP36941 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 RNU1-63P-201ENST00000383902 164 ntBASIC4.41□□□□□ -1.7
LTBRP36941 RNU6-639P-201ENST00000384074 107 ntBASIC4.41□□□□□ -1.7
LTBRP36941 RNU6-310P-201ENST00000384655 107 ntBASIC4.41□□□□□ -1.7
LTBRP36941 MIR124-3-201ENST00000384866 87 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBRP36941 PMCHL1-202ENST00000423102 261 ntBASIC4.41□□□□□ -1.7
LTBRP36941 MTCO1P39-201ENST00000426148 480 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 AC008264.1-201ENST00000447612 367 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBRP36941 RPL37P6-201ENST00000460682 294 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 AC110768.1-201ENST00000509222 400 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC026403.1-201ENST00000518938 295 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC022634.1-201ENST00000520765 532 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC090151.1-201ENST00000520784 730 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AP004371.1-201ENST00000525240 214 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBRP36941 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 AC120057.2-201ENST00000571520 271 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 AC012119.1-201ENST00000603184 222 ntBASIC4.41□□□□□ -1.7
LTBRP36941 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 AC098657.3-201ENST00000620434 263 ntBASIC4.41□□□□□ -1.7
LTBRP36941 AL669831.3-213ENST00000636676 183 ntBASIC4.41□□□□□ -1.7
LTBRP36941 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 AP001273.1-201ENST00000624493 3152 ntBASIC4.41□□□□□ -1.7
LTBRP36941 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LTBRP36941 DHX9P1-201ENST00000436565 3076 ntBASIC4.41□□□□□ -1.7
LTBRP36941 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBRP36941 AC032011.1-201ENST00000611703 1549 ntBASIC4.41□□□□□ -1.7
LTBRP36941 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 AC090337.1-201ENST00000579651 2074 ntBASIC4.41□□□□□ -1.7
LTBRP36941 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBRP36941 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LTBRP36941 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LTBRP36941 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.4□□□□□ -1.7
LTBRP36941 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LTBRP36941 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LTBRP36941 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBRP36941 Y_RNA.145-201ENST00000363527 102 ntBASIC4.4□□□□□ -1.71
LTBRP36941 RNU6-629P-201ENST00000384061 103 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBRP36941 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBRP36941 AL590632.1-201ENST00000424289 371 ntBASIC4.4□□□□□ -1.71
LTBRP36941 RPL21P91-201ENST00000429231 479 ntBASIC4.4□□□□□ -1.71
LTBRP36941 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBRP36941 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LTBRP36941 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LTBRP36941 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBRP36941 HSPE1P6-201ENST00000479457 291 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AF213884.1-201ENST00000488102 463 ntBASIC4.4□□□□□ -1.71
LTBRP36941 SMURF2P1-201ENST00000514992 481 ntBASIC4.4□□□□□ -1.71
LTBRP36941 RNU6-1016P-201ENST00000516689 94 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBRP36941 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.4□□□□□ -1.71
LTBRP36941 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.4□□□□□ -1.71
LTBRP36941 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBRP36941 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBRP36941 HMGB2P1-201ENST00000591146 634 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC008737.2-201ENST00000599446 118 ntBASIC4.4□□□□□ -1.71
LTBRP36941 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBRP36941 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBRP36941 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.4□□□□□ -1.71
LTBRP36941 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LTBRP36941 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBRP36941 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LTBRP36941 KPNA2P1-201ENST00000458289 1591 ntBASIC4.4□□□□□ -1.71
LTBRP36941 MUC2-202ENST00000613187 4845 ntBASIC4.39□□□□□ -1.71
LTBRP36941 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LTBRP36941 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
LTBRP36941 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LTBRP36941 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.39□□□□□ -1.71
LTBRP36941 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LTBRP36941 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LTBRP36941 RNU5A-1-201ENST00000362698 116 ntBASIC4.39□□□□□ -1.71
LTBRP36941 RNU6-173P-201ENST00000364215 104 ntBASIC4.39□□□□□ -1.71
LTBRP36941 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LTBRP36941 Y_RNA.646-201ENST00000410980 101 ntBASIC4.39□□□□□ -1.71
LTBRP36941 ATG3P1-201ENST00000419507 911 ntBASIC4.39□□□□□ -1.71
LTBRP36941 AC244098.2-201ENST00000422068 99 ntBASIC4.39□□□□□ -1.71
LTBRP36941 RPL7P37-201ENST00000425095 738 ntBASIC4.39□□□□□ -1.71
LTBRP36941 AL137792.2-201ENST00000443484 235 ntBASIC4.39□□□□□ -1.71
LTBRP36941 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.39□□□□□ -1.71
LTBRP36941 MIR2053-201ENST00000459295 91 ntBASIC4.39□□□□□ -1.71
LTBRP36941 RPL21P41-201ENST00000459863 264 ntBASIC4.39□□□□□ -1.71
LTBRP36941 MLLT10P2-201ENST00000506434 249 ntBASIC4.39□□□□□ -1.71
LTBRP36941 AC009901.1-201ENST00000506703 541 ntBASIC4.39□□□□□ -1.71
LTBRP36941 AC116337.1-201ENST00000509680 687 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms