Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SNORA51-201ENST00000606420 132 ntBASIC3.59□□□□□ -1.83
RFC1P35251 AL450472.3-201ENST00000615578 367 ntBASIC3.59□□□□□ -1.83
RFC1P35251 AC243312.2-201ENST00000623340 601 ntBASIC3.59□□□□□ -1.83
RFC1P35251 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFC1P35251 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
RFC1P35251 MTCO1P9-201ENST00000505577 1534 ntBASIC3.59□□□□□ -1.84
RFC1P35251 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RFC1P35251 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
RFC1P35251 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.58□□□□□ -1.84
RFC1P35251 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFC1P35251 RNU6-511P-201ENST00000363496 107 ntBASIC3.58□□□□□ -1.84
RFC1P35251 RNU6-1283P-201ENST00000365314 105 ntBASIC3.58□□□□□ -1.84
RFC1P35251 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RFC1P35251 Y_RNA.409-201ENST00000383990 98 ntBASIC3.58□□□□□ -1.84
RFC1P35251 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.58□□□□□ -1.84
RFC1P35251 AC073464.1-201ENST00000429823 534 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC002486.1-201ENST00000435098 391 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.58□□□□□ -1.84
RFC1P35251 AC093156.1-201ENST00000440382 670 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC005094.1-201ENST00000440420 368 ntBASIC3.58□□□□□ -1.84
RFC1P35251 FGF7P6-202ENST00000451282 293 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC108059.3-201ENST00000456388 214 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC007182.2-201ENST00000489251 402 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC114797.1-201ENST00000514003 728 ntBASIC3.58□□□□□ -1.84
RFC1P35251 SCARNA24.1-201ENST00000516465 137 ntBASIC3.58□□□□□ -1.84
RFC1P35251 SNORA67.7-201ENST00000516664 135 ntBASIC3.58□□□□□ -1.84
RFC1P35251 RNU6-64P-201ENST00000517119 105 ntBASIC3.58□□□□□ -1.84
RFC1P35251 IGKV2-26-201ENST00000518305 343 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC103783.1-201ENST00000520506 373 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AP001893.2-201ENST00000526949 202 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AP003072.2-201ENST00000527756 676 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC125611.2-201ENST00000551907 647 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
RFC1P35251 MIR3158-1-201ENST00000583596 81 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC245389.1-201ENST00000605141 529 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC093838.1-201ENST00000613014 469 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC004696.1-201ENST00000614345 607 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC006133.1-201ENST00000617106 264 ntBASIC3.58□□□□□ -1.84
RFC1P35251 MIR6130-201ENST00000619419 109 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
RFC1P35251 AC019226.1-201ENST00000625666 515 ntBASIC3.58□□□□□ -1.84
RFC1P35251 ELF2P3-201ENST00000445099 1506 ntBASIC3.58□□□□□ -1.84
RFC1P35251 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFC1P35251 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFC1P35251 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.57□□□□□ -1.84
RFC1P35251 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.57□□□□□ -1.84
RFC1P35251 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFC1P35251 RNA5SP197-201ENST00000363357 119 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RNU6-173P-201ENST00000364215 104 ntBASIC3.57□□□□□ -1.84
RFC1P35251 Y_RNA.248-201ENST00000364501 109 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RNU6-432P-201ENST00000384196 109 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RNU6-39P-201ENST00000384344 107 ntBASIC3.57□□□□□ -1.84
RFC1P35251 MIR200C-201ENST00000384980 68 ntBASIC3.57□□□□□ -1.84
RFC1P35251 MIR218-2-201ENST00000385006 110 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RPS3AP24-201ENST00000407896 734 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
RFC1P35251 RPS29P4-201ENST00000414733 161 ntBASIC3.57□□□□□ -1.84
RFC1P35251 MTND1P23-201ENST00000416931 372 ntBASIC3.57□□□□□ -1.84
RFC1P35251 CCDC58P2-201ENST00000417131 366 ntBASIC3.57□□□□□ -1.84
RFC1P35251 ELOCP4-201ENST00000420090 333 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.57□□□□□ -1.84
RFC1P35251 RPL31P12-201ENST00000422587 358 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFC1P35251 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.57□□□□□ -1.84
RFC1P35251 AC090774.1-201ENST00000435925 246 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 CR848007.1-201ENST00000442354 1699 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.57□□□□□ -1.84
RFC1P35251 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
RFC1P35251 AC234775.1-201ENST00000454247 670 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.57□□□□□ -1.84
RFC1P35251 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.57□□□□□ -1.84
RFC1P35251 SNORA84-201ENST00000459229 133 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC021205.2-201ENST00000480069 347 ntBASIC3.57□□□□□ -1.84
RFC1P35251 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFC1P35251 AC118273.1-201ENST00000525324 3006 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 SUB1P2-201ENST00000556401 297 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.57□□□□□ -1.84
RFC1P35251 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 BNIP3P33-201ENST00000598912 569 ntBASIC3.57□□□□□ -1.84
RFC1P35251 BDH2P1-201ENST00000602288 736 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
RFC1P35251 AC017083.3-201ENST00000609955 700 ntBASIC3.57□□□□□ -1.84
RFC1P35251 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFC1P35251 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 ZNF826P-207ENST00000622273 1910 ntBASIC3.57□□□□□ -1.84
RFC1P35251 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.57□□□□□ -1.84
RFC1P35251 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.56□□□□□ -1.84
RFC1P35251 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.56□□□□□ -1.84
RFC1P35251 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
RFC1P35251 SNORD115-47-201ENST00000391226 86 ntBASIC3.56□□□□□ -1.84
RFC1P35251 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFC1P35251 EI24P2-201ENST00000397776 1076 ntBASIC3.56□□□□□ -1.84
RFC1P35251 BTF3P7-201ENST00000407097 488 ntBASIC3.56□□□□□ -1.84
RFC1P35251 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
RFC1P35251 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms