Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU1-39P-201ENST00000383897 165 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 RNU6-723P-201ENST00000383973 107 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 MIR320C1-201ENST00000408566 88 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 MTCO1P17-201ENST00000411522 491 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AL445669.1-201ENST00000426743 755 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.5□□□□□ -2.01
SHMT2P34897 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC008850.1-201ENST00000427546 362 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AL356867.1-201ENST00000429623 299 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 Z73417.1-201ENST00000447373 778 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 ANKRD26P4-201ENST00000455755 950 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 ATG12P2-201ENST00000456830 416 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC087276.1-201ENST00000529659 480 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC023538.1-201ENST00000534576 736 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AC128657.1-201ENST00000549459 145 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AMZ2P1-203ENST00000565833 850 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.5□□□□□ -2.01
SHMT2P34897 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC020895.1-201ENST00000595362 272 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AC103710.4-201ENST00000609301 899 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 AL356596.1-201ENST00000624230 379 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
SHMT2P34897 AC099063.3-201ENST00000642066 185 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 OR5H6-203ENST00000642105 978 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHMT2P34897 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.5□□□□□ -2.01
SHMT2P34897 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHMT2P34897 TPTE2P4-201ENST00000258589 1605 ntBASIC2.5□□□□□ -2.01
SHMT2P34897 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHMT2P34897 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHMT2P34897 RPL21P132-201ENST00000331267 462 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHMT2P34897 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 RNU6-270P-201ENST00000364131 105 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 MIR325-201ENST00000385260 98 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 ANAPC10P1-201ENST00000395991 556 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AL590084.2-201ENST00000401481 382 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 RNU6-516P-201ENST00000411381 104 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 MTND1P21-201ENST00000412991 285 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 RPL22P18-201ENST00000417197 377 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 USP9YP20-201ENST00000419224 558 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.49□□□□□ -2.01
SHMT2P34897 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.49□□□□□ -2.01
SHMT2P34897 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.49□□□□□ -2.01
SHMT2P34897 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.49□□□□□ -2.01
SHMT2P34897 TPT1P14-201ENST00000448018 505 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 RPL23AP35-201ENST00000451906 501 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.49□□□□□ -2.01
SHMT2P34897 AC126182.1-201ENST00000478134 357 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 LARP1BP2-201ENST00000486594 519 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC034222.1-201ENST00000494052 532 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.49□□□□□ -2.01
SHMT2P34897 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.49□□□□□ -2.01
SHMT2P34897 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.49□□□□□ -2.01
SHMT2P34897 ACTR3BP3-201ENST00000565577 979 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 TPMTP1-201ENST00000592307 737 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.49□□□□□ -2.01
SHMT2P34897 MIR6852-201ENST00000621699 66 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC068787.1-201ENST00000623908 691 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AL138713.1-201ENST00000624026 2130 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC079597.1-201ENST00000624306 508 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC019226.1-201ENST00000625666 515 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
SHMT2P34897 PCMTD1P7-201ENST00000634506 357 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.49□□□□□ -2.01
SHMT2P34897 AC010680.1-201ENST00000590024 3590 ntBASIC2.49□□□□□ -2.01
SHMT2P34897 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
SHMT2P34897 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 FTLP6-201ENST00000355274 422 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SHMT2P34897 RNU6-754P-201ENST00000391166 107 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 MTND2P9-201ENST00000422293 931 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.48□□□□□ -2.01
SHMT2P34897 RPL7L1P10-201ENST00000427790 463 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AL590383.1-201ENST00000428602 75 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 SUMO1P4-201ENST00000429430 302 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 AL512844.2-201ENST00000433990 593 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.48□□□□□ -2.01
SHMT2P34897 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 RNU4-29P-201ENST00000515943 174 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 RPPH1-2P-201ENST00000516688 293 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms