Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLIP1P30622 AC121333.1-201ENST00000567488 2709 ntBASIC1.65□□□□□ -2.15
CLIP1P30622 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CLIP1P30622 SNORA3A-201ENST00000364113 130 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 RNU6-335P-201ENST00000364563 113 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 ARF4P4-201ENST00000439608 520 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 RNU7-26P-201ENST00000458980 63 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 PABPC1P3-201ENST00000469174 459 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CLIP1P30622 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.64□□□□□ -2.15
CLIP1P30622 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CLIP1P30622 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.64□□□□□ -2.15
CLIP1P30622 AL355297.2-201ENST00000604792 129 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 HMGB1P24-202ENST00000615653 685 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 AC110792.3-201ENST00000595906 1614 ntBASIC1.64□□□□□ -2.15
CLIP1P30622 RNF6P1-201ENST00000444889 1784 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.63□□□□□ -2.15
CLIP1P30622 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLIP1P30622 Y_RNA.205-201ENST00000364128 113 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.63□□□□□ -2.15
CLIP1P30622 AL356867.1-201ENST00000429623 299 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 GDI2P2-201ENST00000445131 608 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.63□□□□□ -2.15
CLIP1P30622 SNORA31.16-201ENST00000516773 139 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 AC019176.1-201ENST00000518519 225 ntBASIC1.63□□□□□ -2.15
CLIP1P30622 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.63□□□□□ -2.15
CLIP1P30622 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.63□□□□□ -2.15
CLIP1P30622 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.63□□□□□ -2.15
CLIP1P30622 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP1P30622 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLIP1P30622 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CLIP1P30622 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CLIP1P30622 MIR373-201ENST00000362273 69 ntBASIC1.62□□□□□ -2.15
CLIP1P30622 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP1P30622 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP1P30622 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.62□□□□□ -2.15
CLIP1P30622 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.62□□□□□ -2.15
CLIP1P30622 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.62□□□□□ -2.15
CLIP1P30622 AC123912.5-201ENST00000605470 343 ntBASIC1.62□□□□□ -2.15
CLIP1P30622 AL590282.1-201ENST00000610379 1136 ntBASIC1.62□□□□□ -2.15
CLIP1P30622 AC092140.2-201ENST00000618027 521 ntBASIC1.62□□□□□ -2.15
CLIP1P30622 SGO1P2-201ENST00000429458 1589 ntBASIC1.62□□□□□ -2.15
CLIP1P30622 AC009812.4-201ENST00000569134 1805 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 OR6C66P-201ENST00000414917 930 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.61□□□□□ -2.15
CLIP1P30622 AIMP1P2-201ENST00000425294 312 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 MTCO3P46-201ENST00000425787 232 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.61□□□□□ -2.15
CLIP1P30622 MTCYBP12-201ENST00000440559 1134 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 ARL5AP2-201ENST00000444698 533 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 HMGN2P10-201ENST00000448085 265 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 AC093767.1-201ENST00000504523 156 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.61□□□□□ -2.15
CLIP1P30622 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.61□□□□□ -2.15
CLIP1P30622 AC211469.2-201ENST00000605461 205 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 AP001486.3-201ENST00000615334 372 ntBASIC1.61□□□□□ -2.15
CLIP1P30622 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CLIP1P30622 HMGN1P14-201ENST00000412459 517 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 AC004022.2-201ENST00000413824 193 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 snoU109.4-201ENST00000458953 143 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 CABYRP1-201ENST00000465493 1045 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.6□□□□□ -2.15
CLIP1P30622 PCNAP1-201ENST00000505363 709 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 RN7SKP179-201ENST00000516126 217 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.6□□□□□ -2.15
CLIP1P30622 BTF3P12-201ENST00000519620 469 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 VN1R107P-201ENST00000601784 209 ntBASIC1.6□□□□□ -2.15
CLIP1P30622 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.59□□□□□ -2.15
CLIP1P30622 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CLIP1P30622 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AC244033.1-201ENST00000426826 870 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CLIP1P30622 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.59□□□□□ -2.15
CLIP1P30622 AL513343.1-201ENST00000451818 792 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AC108059.3-201ENST00000456388 214 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 SNORD97-201ENST00000459187 142 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 RPS23P4-201ENST00000487908 423 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AC110792.2-201ENST00000510278 224 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 RNA5SP436-201ENST00000516020 115 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.59□□□□□ -2.15
CLIP1P30622 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.59□□□□□ -2.15
CLIP1P30622 AC011712.1-201ENST00000588959 234 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 AL138880.2-201ENST00000616214 239 ntBASIC1.59□□□□□ -2.15
CLIP1P30622 RNA5SP498-201ENST00000411342 120 ntBASIC1.58□□□□□ -2.16
CLIP1P30622 AC093155.1-201ENST00000440164 826 ntBASIC1.58□□□□□ -2.16
CLIP1P30622 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
CLIP1P30622 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
CLIP1P30622 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.58□□□□□ -2.16
CLIP1P30622 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.58□□□□□ -2.16
CLIP1P30622 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.58□□□□□ -2.16
CLIP1P30622 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.58□□□□□ -2.16
CLIP1P30622 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CLIP1P30622 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.57□□□□□ -2.16
CLIP1P30622 SNORD14B-201ENST00000364533 90 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 MIR532-201ENST00000385025 91 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 RABEPKP1-201ENST00000440529 1026 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 AL500527.1-201ENST00000448532 255 ntBASIC1.57□□□□□ -2.16
CLIP1P30622 RPS27P1-201ENST00000450552 247 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms